RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ARP10275 920 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SLC1A1P43005 524 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PEX5LQ8IYB4 626 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PCYOX1LQ8NBM8 494 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ENKURQ8TC29 256 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 KRT35Q92764 455 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ING2Q9H160 280 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SIK3Q9Y2K2 1263 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 RGS12O14924 1447 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 GCLMP48507 274 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 DR1Q01658 176 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ZMYND12Q9H0C1 365 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SLC12A6Q9UHW9 1150 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 WBP11Q9Y2W2 641 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 SPDYE3A6NKU9 549 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 TOMM70O94826 608 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 CHRNA3P32297 505 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 HSD17B3P37058 310 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SCTRP47872 440 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 GPBP1Q86WP2 473 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PSD4Q8NDX1 1056 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 AENQ8WTP8 325 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 RAD54LQ92698 747 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 NSMCE4AQ9NXX6 385 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 GPC6Q9Y625 555 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 DYNC1LI2O43237 492 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 PAX3P23760 479 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 CCNE1P24864 410 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 NEK8Q86SG6 692 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ZSCAN29Q8IWY8 852 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 NSMCE1Q8WV22 266 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SCFD1Q8WVM8 642 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ATG4AQ8WYN0 398 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 CAPN9O14815 690 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SLC26A4O43511 780 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 GARSP41250 739 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 BFSP1Q12934 665 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SUPT20HQ8NEM7 779 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 RIN3Q8TB24 985 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SCYL1Q96KG9 808 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ANKFY1Q9P2R3 1169 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SH3GLB1Q9Y371 365 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 INHBAP08476 426 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 FAM86B2P0C5J1 330 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 DHX38Q92620 1227 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 CCDC126Q96EE4 140 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 STOML2Q9UJZ1 356 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 AFG3L2Q9Y4W6 797 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 MATN2O00339 956 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 PRDX5P30044 214 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 RPL5P46777 297 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 GPC5P78333 572 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 MRPS15P82914 257 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 SNAP47Q5SQN1 464 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TPCN2Q8NHX9 752 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 FMO2Q99518 471 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 GPR108Q9NPR9 543 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SUN2Q9UH99 717 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 CCDC189A1A4V9 331 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 KRT87PA6NCN2 255 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ATMINO43313 823 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 RABGGTBP53611 331 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 CNOT6LQ96LI5 555 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 XAB2Q9HCS7 855 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 ING3Q9NXR8 418 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 AGTPBP1Q9UPW5 1226 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 BAIAP3O94812 1187 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TRPC1P48995 793 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SNRPFP62306 86 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 COX10Q12887 443 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 C1orf228Q6PIY5 440 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ZNF662Q6ZS27 426 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 PROM2Q8N271 834 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ARHGEF1Q92888 912 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 CCT7Q99832 543 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 NAALADL1Q9UQQ1 740 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 FOXD2O60548 495 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 PHF2O75151 1096 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 DNAJC3Q13217 504 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 DRAP1Q14919 205 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 A0A1W2PPM1 405 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 RECQLP46063 649 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 MFAP3P55082 362 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ANKRD36BP1Q96IX9 119 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 LPIN3Q9BQK8 851 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 RMI1Q9H9A7 625 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TOPORSQ9NS56 1045 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 CIAO1O76071 339 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 Q4G0T1 1027 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 H3BNX3 289 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 H3BRJ5 948 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 MX2P20592 715 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 OVGP1Q12889 678 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 HABP4Q5JVS0 413 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 THEMIS2Q5TEJ8 643 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ADCK1Q86TW2 530 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TRIM59Q8IWR1 403 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 RIBC1Q8N443 379 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 UCMAQ8WVF2 138 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms