RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MROH7Q68CQ1 1323 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 DNAJC25-GNG10A0A024R161 153 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.24□□□□□ -0.29
CIITA-212ENST00000618207 INSRRP14616 1297 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 TMOD1P28289 359 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 HPDP32754 393 aaPredicted RBP13.24□□□□□ -0.29
CIITA-212ENST00000618207 CLDN10P78369 228 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 SNAPC2Q13487 334 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 TRIP13Q15645 432 aaPredicted RBP13.24□□□□□ -0.29
CIITA-212ENST00000618207 ATF7IP2Q5U623 682 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 CCDC62Q6P9F0 684 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 CCDC137Q6PK04 289 aaKnown RBP13.24□□□□□ -0.29
CIITA-212ENST00000618207 USP50Q70EL3 339 aaPredicted RBP13.24□□□□□ -0.29
CIITA-212ENST00000618207 ENOSF1Q7L5Y1 443 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 DPH6Q7L8W6 267 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 JAMLQ86YT9 394 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 AFG1LQ8WV93 481 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 NAP1L3Q99457 506 aaPredicted RBP13.24□□□□□ -0.29
CIITA-212ENST00000618207 A0A087WZ62 844 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 PDHXO00330 501 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 ZC3H11AO75152 810 aaKnown RBP eCLIP13.23□□□□□ -0.29
CIITA-212ENST00000618207 PIGRP01833 764 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 VPS41P49754 854 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 RWDD2BP57060 319 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 ALS2CLQ60I27 953 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 BRSK2Q8IWQ3 736 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 FDXACB1Q9BRP7 624 aaPredicted RBP13.23□□□□□ -0.29
CIITA-212ENST00000618207 WNT8AQ9H1J5 351 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 SMARCAD1Q9H4L7 1026 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 UVRAGQ9P2Y5 699 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 BRCA2P51587 3418 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 SMIM23A6NLE4 172 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 OGTO15294 1046 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 RARAP10276 462 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 FGFR4P22455 802 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 EFNA5P52803 228 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 CDH8P55286 799 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 POU5F1Q01860 360 aaKnown RBP13.23□□□□□ -0.29
CIITA-212ENST00000618207 TMEM62Q0P6H9 643 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 CUL1Q13616 776 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 MXD4Q14582 209 aaPredicted RBP13.23□□□□□ -0.29
CIITA-212ENST00000618207 UAP1Q16222 522 aaPredicted RBP13.23□□□□□ -0.29
CIITA-212ENST00000618207 EFCAB13Q8IY85 973 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 TCP11Q8WWU5 503 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 ZNF606Q8WXB4 792 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 RPS6KC1Q96S38 1066 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 LRRC4CQ9HCJ2 640 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 RNF19AQ9NV58 838 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 POLIQ9UNA4 740 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 KAT6AQ92794 2004 aa13.23□□□□□ -0.29
CIITA-212ENST00000618207 HADHBP55084 474 aaKnown RBP13.22□□□□□ -0.29
CIITA-212ENST00000618207 PPFIA1Q13136 1202 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 ATP13A4Q4VNC1 1196 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 SLC13A5Q86YT5 568 aaPredicted RBP13.22□□□□□ -0.29
CIITA-212ENST00000618207 C1orf131Q8NDD1 294 aaKnown RBP13.22□□□□□ -0.29
CIITA-212ENST00000618207 FBXO25Q8TCJ0 367 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 CD101Q93033 1021 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 ACSF2Q96CM8 615 aaPredicted RBP13.22□□□□□ -0.29
CIITA-212ENST00000618207 HERPUD2Q9BSE4 406 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 PCDHA3Q9Y5H8 950 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 MGAMO43451 1857 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 DOCK3Q8IZD9 2030 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 CCL15-CCL14A0A0B4J2E2 113 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 CCDC66A2RUB6 948 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 ZEB2O60315 1214 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 CD19P15391 556 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 ABCD1P33897 745 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 ACTN2P35609 894 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 RPL7AP62424 266 aaKnown RBP13.22□□□□□ -0.29
CIITA-212ENST00000618207 CCL15Q16663 113 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 DUOXA2Q1HG44 320 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 ZPBP2Q6X784 338 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 CCDC25Q86WR0 208 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 ABRAQ8N0Z2 381 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 GPRC5AQ8NFJ5 357 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 FMO2Q99518 471 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 ERP44Q9BS26 406 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 CCDC113Q9H0I3 377 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 MROH8Q9H579 483 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 CISHQ9NSE2 258 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 DIS3Q9Y2L1 958 aaKnown RBP13.22□□□□□ -0.29
CIITA-212ENST00000618207 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
CIITA-212ENST00000618207 BTBD19C9JJ37 291 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 PI4K2BG5E9Z4 385 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 FAM189A1O60320 539 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 LGALS2P05162 132 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 BPIFB4P59827 614 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 NOMO3P69849 1222 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 PDCLQ13371 301 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 ZNF699Q32M78 642 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 UBAP2Q5T6F2 1119 aaKnown RBP13.21□□□□□ -0.29
CIITA-212ENST00000618207 CYP4A22Q5TCH4 519 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 DPP9Q86TI2 863 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 RAB17Q9H0T7 212 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 TSPYL1Q9H0U9 437 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 DNAJC17Q9NVM6 304 aaKnown RBP13.21□□□□□ -0.29
CIITA-212ENST00000618207 ERAP1Q9NZ08 941 aa13.21□□□□□ -0.29
CIITA-212ENST00000618207 TTC7AQ9ULT0 858 aaPredicted RBP13.21□□□□□ -0.29
CIITA-212ENST00000618207 A0A0G2JMZ2 1700 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms