RNA–Protein interactions for RNA: ENST00000617847.4

DDB2-213, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-213ENST00000617847 ANKRD54Q6NXT1 300 aa13.5□□□□□ -0.25
DDB2-213ENST00000617847 PDXDC1Q6P996 788 aa13.5□□□□□ -0.25
DDB2-213ENST00000617847 SYCE2Q6PIF2 218 aa13.5□□□□□ -0.25
DDB2-213ENST00000617847 PRSS55Q6UWB4 352 aaPredicted RBP13.5□□□□□ -0.25
DDB2-213ENST00000617847 CBWD2Q8IUF1 395 aa13.5□□□□□ -0.25
DDB2-213ENST00000617847 SLC9A9Q8IVB4 645 aa13.5□□□□□ -0.25
DDB2-213ENST00000617847 GUF1Q8N442 669 aaKnown RBP13.5□□□□□ -0.25
DDB2-213ENST00000617847 XXYLT1Q8NBI6 393 aa13.5□□□□□ -0.25
DDB2-213ENST00000617847 SMRP1Q8NCR6 262 aa13.5□□□□□ -0.25
DDB2-213ENST00000617847 DMAC2Q9NW81 257 aa13.5□□□□□ -0.25
DDB2-213ENST00000617847 NUB1Q9Y5A7 615 aa13.5□□□□□ -0.25
DDB2-213ENST00000617847 PCDHA5Q9Y5H7 936 aa13.5□□□□□ -0.25
DDB2-213ENST00000617847 A0A0C4DFX4 3053 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 PLXNA3P51805 1871 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 I3L4J1 428 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 M0QZQ0 153 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 PPEF2O14830 753 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 MBTPS2O43462 519 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 KIF20AO95235 890 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 EPCAMP16422 314 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 HOXB8P17481 243 aaPredicted RBP13.49□□□□□ -0.25
DDB2-213ENST00000617847 PAX3P23760 479 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 TKTP29401 623 aaKnown RBP13.49□□□□□ -0.25
DDB2-213ENST00000617847 SMAD4Q13485 552 aaKnown RBP13.49□□□□□ -0.25
DDB2-213ENST00000617847 MRPL58Q14197 206 aaKnown RBP13.49□□□□□ -0.25
DDB2-213ENST00000617847 SURF1Q15526 300 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 PSMD5Q16401 504 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 C9orf57Q5W0N0 161 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 LLGL2Q6P1M3 1020 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 CEP57Q86XR8 500 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 CLSTN3Q9BQT9 956 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 PDE11AQ9HCR9 933 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 DPP3Q9NY33 737 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 MTRRQ9UBK8 725 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 HOOK1Q9UJC3 728 aaKnown RBP13.49□□□□□ -0.25
DDB2-213ENST00000617847 TRAF3IP3Q9Y228 551 aa13.49□□□□□ -0.25
DDB2-213ENST00000617847 NCOR1O75376 2440 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 KINO60870 393 aaKnown RBP13.48□□□□□ -0.25
DDB2-213ENST00000617847 SMC2O95347 1197 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 MCM4P33991 863 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 CYP2J2P51589 502 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 MYBPC2Q14324 1141 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 SNRNP35Q16560 246 aaKnown RBP13.48□□□□□ -0.25
DDB2-213ENST00000617847 NFIL3Q16649 462 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 COBLL1Q53SF7 1204 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 PTCRAQ6ISU1 281 aaPredicted RBP13.48□□□□□ -0.25
DDB2-213ENST00000617847 LILRA6Q6PI73 481 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 ANKS3Q6ZW76 656 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 CXorf38Q8TB03 319 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 S1PR5Q9H228 398 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 DZANK1Q9NVP4 752 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 PCDHB8Q9UN66 801 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 BACE2Q9Y5Z0 518 aa13.48□□□□□ -0.25
DDB2-213ENST00000617847 TBC1D4O60343 1298 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 PRPF40AO75400 957 aaKnown RBP13.47□□□□□ -0.25
DDB2-213ENST00000617847 IL9P15248 144 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 RPL17P18621 184 aaKnown RBP13.47□□□□□ -0.25
DDB2-213ENST00000617847 LILRA4P59901 499 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 CYP24A1Q07973 514 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 PSMD6Q15008 389 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 CLUL1Q15846 466 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 ZNF658Q5TYW1 1059 aaPredicted RBP13.47□□□□□ -0.25
DDB2-213ENST00000617847 C1orf127Q8N9H9 656 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 NOC3LQ8WTT2 800 aaKnown RBP13.47□□□□□ -0.25
DDB2-213ENST00000617847 CACTINQ8WUQ7 758 aaKnown RBP13.47□□□□□ -0.25
DDB2-213ENST00000617847 SUSD6Q92537 303 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 ERCC4Q92889 916 aaPredicted RBP13.47□□□□□ -0.25
DDB2-213ENST00000617847 SMARCE1Q969G3 411 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 MFSD14AQ96MC6 490 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 INTS13Q9NVM9 706 aa13.47□□□□□ -0.25
DDB2-213ENST00000617847 SPTLC1O15269 473 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 ADAM12O43184 909 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 EXOC3O60645 756 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 PAPLNO95428 1278 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 GLUD1P00367 558 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 TFAMQ00059 246 aaKnown RBP13.46□□□□□ -0.25
DDB2-213ENST00000617847 SMAD2Q15796 467 aaKnown RBP13.46□□□□□ -0.25
DDB2-213ENST00000617847 ZCWPW2Q504Y3 356 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.25
DDB2-213ENST00000617847 RSPO2Q6UXX9 243 aaPredicted RBP13.46□□□□□ -0.25
DDB2-213ENST00000617847 RDH13Q8NBN7 331 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 HDAC7Q8WUI4 952 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 BORCS6Q96GS4 357 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 GTPBP4Q9BZE4 634 aaKnown RBP13.46□□□□□ -0.25
DDB2-213ENST00000617847 GZF1Q9H116 711 aaPredicted RBP13.46□□□□□ -0.25
DDB2-213ENST00000617847 MAPK8IP1Q9UQF2 711 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 FAM50BQ9Y247 325 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 PTPRJQ12913 1337 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 TTC28Q96AY4 2481 aa13.46□□□□□ -0.25
DDB2-213ENST00000617847 VCANP13611 3396 aa13.46□□□□□ -0.26
DDB2-213ENST00000617847 TGM5O43548 720 aa13.46□□□□□ -0.26
DDB2-213ENST00000617847 CALUO43852 315 aaPredicted RBP13.46□□□□□ -0.26
DDB2-213ENST00000617847 NR3C1P04150 777 aa13.46□□□□□ -0.26
DDB2-213ENST00000617847 TYMPP19971 482 aa13.46□□□□□ -0.26
DDB2-213ENST00000617847 RAB33AQ14088 237 aa13.46□□□□□ -0.26
DDB2-213ENST00000617847 SLC8B1Q6J4K2 584 aa13.46□□□□□ -0.26
DDB2-213ENST00000617847 WDR49Q8IV35 697 aa13.46□□□□□ -0.26
DDB2-213ENST00000617847 SMYD4Q8IYR2 804 aaPredicted RBP13.46□□□□□ -0.26
DDB2-213ENST00000617847 APPL2Q8NEU8 664 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms