RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 NIF3L1Q9GZT8 377 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 CYP3A43Q9HB55 503 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 NLRC4Q9NPP4 1024 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 ARHGAP20Q9P2F6 1191 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 CST3P01034 146 aaPredicted RBP12.62□□□□□ -0.39
PDPN-211ENST00000617617 CLTBP09497 229 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 PNPLA4P41247 253 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 ZNF132P52740 706 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 RTN4RL1Q86UN2 441 aaPredicted RBP12.62□□□□□ -0.39
PDPN-211ENST00000617617 GSTCDQ8NEC7 633 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 OLIG1Q8TAK6 271 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 LINC01599Q8WXQ3 324 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 SEPT8Q92599 483 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 WNT8AQ9H1J5 351 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 HIPK3Q9H422 1215 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 COL4A6Q14031 1691 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 TET1Q8NFU7 2136 aa12.62□□□□□ -0.39
PDPN-211ENST00000617617 PTGESO14684 152 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 PHACTR2O75167 634 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 YWHAEP62258 255 aaKnown RBP12.61□□□□□ -0.39
PDPN-211ENST00000617617 NFX1Q12986 1120 aaKnown RBP12.61□□□□□ -0.39
PDPN-211ENST00000617617 TRPC3Q13507 836 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 C10orf76Q5T2E6 689 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 LMBRD2Q68DH5 695 aaPredicted RBP12.61□□□□□ -0.39
PDPN-211ENST00000617617 GJB7Q6PEY0 223 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 RAD9BQ6WBX8 426 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 AGMOQ6ZNB7 445 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 ADAM2Q99965 735 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 NHEJ1Q9H9Q4 299 aaPredicted RBP12.61□□□□□ -0.39
PDPN-211ENST00000617617 NUB1Q9Y5A7 615 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 ESPNB1AK53 854 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 PQBP1O60828 265 aaKnown RBP12.61□□□□□ -0.39
PDPN-211ENST00000617617 CAPN15O75808 1086 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 CYLC1P35663 651 aaPredicted RBP12.61□□□□□ -0.39
PDPN-211ENST00000617617 ASPAP45381 313 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 MYL6P60660 151 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 TATDN2Q93075 761 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 UROC1Q96N76 676 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 CHP1Q99653 195 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 GDAP2Q9NXN4 497 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 LRRN2O75325 713 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 P4HA1P13674 534 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 RPL9P32969 192 aaKnown RBP12.61□□□□□ -0.39
PDPN-211ENST00000617617 RAPGEF1Q13905 1077 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 LRRC26Q2I0M4 334 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 ZNF699Q32M78 642 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 C9orf57Q5W0N0 161 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 ZNF677Q86XU0 584 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 SLC30A5Q8TAD4 765 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 SPATA18Q8TC71 538 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 HES2Q9Y543 173 aa12.61□□□□□ -0.39
PDPN-211ENST00000617617 EPN1Q9Y6I3 576 aaPredicted RBP12.61□□□□□ -0.39
PDPN-211ENST00000617617 CENPFP49454 3210 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 GOLGA6L9A6NEM1 432 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 SOWAHDA6NJG2 315 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 FOXN3O00409 490 aaPredicted RBP12.6□□□□□ -0.39
PDPN-211ENST00000617617 EVI5O60447 810 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 NDUFA10O95299 355 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 PFKMP08237 780 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 BPIFB4P59827 614 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 PAWRQ96IZ0 340 aaKnown RBP12.6□□□□□ -0.39
PDPN-211ENST00000617617 TMEM161AQ9NX61 479 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 ADGRG1Q9Y653 693 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 ARL5CA6NH57 179 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 ITGB3P05106 788 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 AKAP5P24588 427 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 INCA1Q0VD86 236 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 GRIK3Q13003 919 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 BMS1Q14692 1282 aaKnown RBP12.6□□□□□ -0.39
PDPN-211ENST00000617617 CCAR2Q8N163 923 aaKnown RBP12.6□□□□□ -0.39
PDPN-211ENST00000617617 PPM1KQ8N3J5 372 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 ZNF560Q96MR9 790 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 RSAD1Q9HA92 442 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 PARP2Q9UGN5 583 aa12.6□□□□□ -0.39
PDPN-211ENST00000617617 ZSCAN12O43309 604 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 TIMP1P01033 207 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 TUBB4AP04350 444 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 KLHL30Q0D2K2 578 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 MYO1EQ12965 1108 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 CXCL16Q9H2A7 254 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 RNF19AQ9NV58 838 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 NOCTQ9UK39 431 aaKnown RBP12.59□□□□□ -0.39
PDPN-211ENST00000617617 KIAA1671Q9BY89 1806 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 ENPP3O14638 875 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 OFD1O75665 1012 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 KRT83P78385 493 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 SLC18A3Q16572 532 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 ZNF667Q5HYK9 610 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 CNKSR3Q6P9H4 555 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 TXLNBQ8N3L3 684 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 VWCEQ96DN2 955 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 DDX27Q96GQ7 796 aaKnown RBP12.59□□□□□ -0.39
PDPN-211ENST00000617617 HPDLQ96IR7 371 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 INTUQ9ULD6 942 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 CEP350Q5VT06 3117 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 UMODL1Q5DID0 1318 aa12.59□□□□□ -0.39
PDPN-211ENST00000617617 PJA2O43164 708 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms