RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CGNQ9P2M7 1197 aaKnown RBP9.38□□□□□ -0.91
GPC6-202ENST00000617456 KCNH3Q9ULD8 1083 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 NOL7Q9UMY1 257 aaKnown RBP9.38□□□□□ -0.91
GPC6-202ENST00000617456 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.38□□□□□ -0.91
GPC6-202ENST00000617456 CHD6Q8TD26 2715 aa9.38□□□□□ -0.91
GPC6-202ENST00000617456 USP24Q9UPU5 2620 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 A0A087WWV3 80 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.37□□□□□ -0.91
GPC6-202ENST00000617456 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 LRRIQ4A6NIV6 560 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 PPP1R12AO14974 1030 aaPredicted RBP9.37□□□□□ -0.91
GPC6-202ENST00000617456 ECI2O75521 394 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 THP07101 528 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 RHOP08100 348 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 ADRB1P08588 477 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 OR52Z1P0C646 297 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 PYGBP11216 843 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 CEBPBP17676 345 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 LIG1P18858 919 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 PRPHP41219 470 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 RPS9P46781 194 aaKnown RBP9.37□□□□□ -0.91
GPC6-202ENST00000617456 EFNA5P52803 228 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 ADCY1Q08828 1119 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 RAB33AQ14088 237 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 PPP2R5AQ15172 486 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 SLC5A9Q2M3M2 681 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 CDCA2Q69YH5 1023 aaPredicted RBP9.37□□□□□ -0.91
GPC6-202ENST00000617456 FZD8Q9H461 694 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 BRD9Q9H8M2 597 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 PRMT7Q9NVM4 692 aaPredicted RBP9.37□□□□□ -0.91
GPC6-202ENST00000617456 CDY1Q9Y6F8 540 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 PATJQ8NI35 1801 aa9.37□□□□□ -0.91
GPC6-202ENST00000617456 SHISA7A6NL88 538 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 PTGESO14684 152 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 SLC26A4O43511 780 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 USO1O60763 962 aaKnown RBP9.36□□□□□ -0.91
GPC6-202ENST00000617456 DTNBO60941 627 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 RECQL4O94761 1208 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 CYP11B2P19099 503 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 IGFBP6P24592 240 aaPredicted RBP9.36□□□□□ -0.91
GPC6-202ENST00000617456 MCM7P33993 719 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 NOP2P46087 812 aaKnown RBP9.36□□□□□ -0.91
GPC6-202ENST00000617456 NRLP54845 237 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 ELAVL2Q12926 359 aaKnown RBP9.36□□□□□ -0.91
GPC6-202ENST00000617456 FZD5Q13467 585 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 GNL2Q13823 731 aaKnown RBP9.36□□□□□ -0.91
GPC6-202ENST00000617456 C8orf34Q49A92 452 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 PDXDC1Q6P996 788 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 POTEHQ6S545 545 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 CCDC83Q8IWF9 413 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 ZBTB8OSQ8IWT0 167 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 C4orf32Q8N8J7 132 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 IGSF22Q8N9C0 903 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 NETO1Q8TDF5 533 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 KCNV2Q8TDN2 545 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 KIFAP3Q92845 792 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 TCEAL4Q96EI5 215 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 CORO1BQ9BR76 489 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 TIPINQ9BVW5 301 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 FAM126AQ9BYI3 521 aaPredicted RBP9.36□□□□□ -0.91
GPC6-202ENST00000617456 TMEM60Q9H2L4 133 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 C17orf75Q9HAS0 396 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 LMAN1LQ9HAT1 526 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 UPF2Q9HAU5 1272 aaKnown RBP9.36□□□□□ -0.91
GPC6-202ENST00000617456 GPRC5CQ9NQ84 441 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 GDE1Q9NZC3 331 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 MTRRQ9UBK8 725 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 USP20Q9Y2K6 914 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 GDAQ9Y2T3 454 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 NOTCH4Q99466 2003 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 CFAP47Q6ZTR5 3102 aa9.36□□□□□ -0.91
GPC6-202ENST00000617456 CCDC189A1A4V9 331 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 ANKRD33BA6NCL7 494 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 TTLL13PA6NNM8 815 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 I3L4J1 428 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 MAN2B1O00754 1011 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 PRRG1O14668 218 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 SLC30A4O14863 429 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 N4BP3O15049 544 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 B3GAT3O94766 335 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 LRG1P02750 347 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 POU2F2P09086 479 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 TDGF1P13385 188 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 ATP2B1P20020 1258 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 SCP2P22307 547 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 FGFR3P22607 806 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 GUCY2CP25092 1073 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 TKTP29401 623 aaKnown RBP9.35□□□□□ -0.91
GPC6-202ENST00000617456 ELF1P32519 619 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 NAMPTP43490 491 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 CD151P48509 253 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 ARPP19P56211 112 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 SRSF5Q13243 272 aaKnown RBP9.35□□□□□ -0.91
GPC6-202ENST00000617456 SIM2Q14190 667 aaPredicted RBP9.35□□□□□ -0.91
GPC6-202ENST00000617456 PPP2R5DQ14738 602 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 RILPL1Q5EBL4 403 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 FAM78AQ5JUQ0 283 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 GLRA4Q5JXX5 417 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 TTC38Q5R3I4 469 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms