RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 UPP1Q16831 310 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 CCDC40Q4G0X9 1142 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 ANO6Q4KMQ2 910 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 LMBRD2Q68DH5 695 aaPredicted RBP17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 C11orf57Q6ZUT1 292 aaPredicted RBP17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 FRMD5Q7Z6J6 570 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 ENOX1Q8TC92 643 aaKnown RBP17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 PLEKHO2Q8TD55 490 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 RABGGTAQ92696 567 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 BORCS6Q96GS4 357 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 TMEM169Q96HH4 297 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 IGSF21Q96ID5 467 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 PAAF1Q9BRP4 392 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 CACNG4Q9UBN1 327 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 ARMCX3Q9UH62 379 aaPredicted RBP17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 HCN4Q9Y3Q4 1203 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 ANK1P16157 1881 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 TRIOO75962 3097 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 FAM86C2PA6NEL3 165 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 H3BNC9 293 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 PODXLO00592 558 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 IKBKBO14920 756 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 DEKP35659 375 aaKnown RBP17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 GUCY2FP51841 1108 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 MCCD1P59942 119 aaPredicted RBP17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 CLDN10P78369 228 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 PLCB3Q01970 1234 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 BFSP1Q12934 665 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 TMEM31Q5JXX7 168 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 CREBRFQ8IUR6 639 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 ZNF516Q92618 1163 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 FUCA2Q9BTY2 467 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 GZF1Q9H116 711 aaPredicted RBP17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 THAP9Q9H5L6 903 aa17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 PUF60Q9UHX1 559 aaKnown RBP17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 R3HCC1Q9Y3T6 440 aaKnown RBP17.7■□□□□ 0.42
SPTSSB-204ENST00000617024 PDCD11Q14690 1871 aaKnown RBP17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 NLRC5Q86WI3 1866 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 LRRIQ3A6PVS8 624 aaPredicted RBP17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 STX10O60499 249 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 B3GAT3O94766 335 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 ITGB1P05556 798 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 DLG4P78352 724 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 C9orf57Q5W0N0 161 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 OR5B17Q8NGF7 314 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 MTMR12Q9C0I1 747 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 ALG13Q9NP73 1137 aaKnown RBP17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 CD320Q9NPF0 282 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 STK39Q9UEW8 545 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 ADAM28Q9UKQ2 775 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 COG5Q9UP83 839 aa17.69■□□□□ 0.42
SPTSSB-204ENST00000617024 ANO9A1A5B4 782 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 TMEM189-UBE2V1I3L0A0 370 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 PIRO00625 290 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 LPXNO60711 386 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 PHACTR2O75167 634 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 PAX3P23760 479 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 RBP5P82980 135 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 UBE3AQ05086 875 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 TCERG1LQ5VWI1 586 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 TRAPPC11Q7Z392 1133 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 DDX53Q86TM3 631 aaKnown RBP17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 TMEM173Q86WV6 379 aaPredicted RBP17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 FAM114A1Q8IWE2 563 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 TMEM130Q8N3G9 435 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 C1orf127Q8N9H9 656 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 SPPL3Q8TCT6 385 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 MARCH5Q9NX47 278 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 MAGEC2Q9UBF1 373 aaPredicted RBP17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 AGAP1Q9UPQ3 857 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 LZTS1Q9Y250 596 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 PTPRJQ12913 1337 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 KIAA1671Q9BY89 1806 aa17.68■□□□□ 0.42
SPTSSB-204ENST00000617024 SMTNL1A8MU46 457 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 F8W810 466 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 TRAPPC3O43617 180 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 GPR37L1O60883 481 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 KIF4AO95239 1232 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 C4BPAP04003 597 aaKnown RBP17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 ITGB3P05106 788 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 KRT19P08727 400 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 TRIM49P0CI25 452 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 TRIM49CP0CI26 452 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 GTF2H1P32780 548 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 MARSP56192 900 aaKnown RBP17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 TRPC3Q13507 836 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 C1orf220Q5T0J3 134 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 HASPINQ8TF76 798 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 BCL7CQ8WUZ0 217 aaPredicted RBP17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 FAM84AQ96KN4 292 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 BPIFA3Q9BQP9 254 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 NFE2L3Q9Y4A8 694 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 NUB1Q9Y5A7 615 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 C5orf42Q9H799 3197 aa17.67■□□□□ 0.42
SPTSSB-204ENST00000617024 GRM6O15303 877 aa17.66■□□□□ 0.42
SPTSSB-204ENST00000617024 CAVIN2O95810 425 aa17.66■□□□□ 0.42
SPTSSB-204ENST00000617024 IGFBP6P24592 240 aaPredicted RBP17.66■□□□□ 0.42
SPTSSB-204ENST00000617024 POLR2BP30876 1174 aaKnown RBP17.66■□□□□ 0.42
SPTSSB-204ENST00000617024 PNPLA4P41247 253 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms