RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 TICRRQ7Z2Z1 1910 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 A0A1B0GUA9 196 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 CCDC194A0A1B0GVG4 234 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 SLC37A4O43826 429 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 LRG1P02750 347 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 THP07101 528 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 VIPR2P41587 438 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 CCR2P41597 374 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 POU5F1BQ06416 359 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 LRRC32Q14392 662 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 NAB2Q15742 525 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 PSAPL1Q6NUJ1 521 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 PIK3AP1Q6ZUJ8 805 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 RGL1Q9NZL6 768 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 F5P12259 2224 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 ZFYVE26Q68DK2 2539 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 VWA8A3KMH1 1905 aa19.32■□□□□ 0.68
TRAPPC3-209ENST00000616395 ARHGEF37A1IGU5 675 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 WDR27A2RRH5 827 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 ZNF263O14978 683 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 KRT2P35908 639 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 SPIRE1Q08AE8 756 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 SF3A1Q15459 793 aaKnown RBP19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 WDR44Q5JSH3 913 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 MOXD1Q6UVY6 613 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 WDR5BQ86VZ2 330 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 SMARCD2Q92925 531 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 FOXP1Q9H334 677 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 BACE2Q9Y5Z0 518 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 NCANO14594 1321 aa19.31■□□□□ 0.68
TRAPPC3-209ENST00000616395 ANKRD11Q6UB99 2663 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC3-209ENST00000616395 ARNTLO00327 626 aa19.3■□□□□ 0.68
TRAPPC3-209ENST00000616395 ZNF197O14709 1029 aa19.3■□□□□ 0.68
TRAPPC3-209ENST00000616395 MICAL2O94851 1124 aa19.3■□□□□ 0.68
TRAPPC3-209ENST00000616395 GSE1Q14687 1217 aa19.3■□□□□ 0.68
TRAPPC3-209ENST00000616395 DEPDC1BQ8WUY9 529 aa19.3■□□□□ 0.68
TRAPPC3-209ENST00000616395 TNFRSF25Q93038 417 aa19.3■□□□□ 0.68
TRAPPC3-209ENST00000616395 NFKBIZQ9BYH8 718 aa19.3■□□□□ 0.68
TRAPPC3-209ENST00000616395 SMOC1Q9H4F8 434 aa19.3■□□□□ 0.68
TRAPPC3-209ENST00000616395 NOL7Q9UMY1 257 aaKnown RBP19.3■□□□□ 0.68
TRAPPC3-209ENST00000616395 PRRG1O14668 218 aa19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 LETM1O95202 739 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 EPN2O95208 641 aa19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 TKTP29401 623 aaKnown RBP19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 HOXA6P31267 233 aa19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 SOX9P48436 509 aa19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 CTTNQ14247 550 aaKnown RBP19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 EPHA7Q15375 998 aa19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 PDZD4Q76G19 769 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 DIS3L2Q8IYB7 885 aaKnown RBP19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 ZNF461Q8TAF7 563 aa19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 DDX27Q96GQ7 796 aaKnown RBP19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 DYDC2Q96IM9 177 aa19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 LOXL4Q96JB6 756 aa19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 SNTG2Q9NY99 539 aa19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 GREB1Q4ZG55 1949 aa19.29■□□□□ 0.68
TRAPPC3-209ENST00000616395 SLC38A8A6NNN8 435 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 BTBD18B2RXH4 712 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 I3L4J1 428 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 WNT7AO00755 349 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 RECQL4O94761 1208 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 B3GAT3O94766 335 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 YEATS4O95619 227 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 SPINK2P20155 84 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 GLRA2P23416 452 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 U2AF2P26368 475 aaKnown RBP eCLIP19.28■□□□□ 0.686e-6■□□□□ 10.3
TRAPPC3-209ENST00000616395 ELF1P32519 619 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 ARL2P36404 184 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 MLLT6P55198 1093 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 ROR1Q01973 937 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 CYP4A11Q02928 519 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 FOXC1Q12948 553 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 STK38Q15208 465 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 RILPL1Q5EBL4 403 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 PLA2G2CQ5R387 149 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 ANKS3Q6ZW76 656 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 NEK8Q86SG6 692 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 ZSCAN18Q8TBC5 510 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 CSGALNACT1Q8TDX6 532 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 FAM20AQ96MK3 541 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 TMEM121BQ9BXQ6 578 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 ZSWIM4Q9H7M6 989 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 KCNMB3Q9NPA1 279 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 ARID2Q68CP9 1835 aa19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 FASNP49327 2511 aaKnown RBP19.28■□□□□ 0.68
TRAPPC3-209ENST00000616395 TMEM189-UBE2V1I3L0A0 370 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 GIPC1O14908 333 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 MOSPD3O75425 235 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 GJA1P17302 382 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 RAP1GAPP47736 663 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 NOVA1P51513 510 aaKnown RBP19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 KPNA1P52294 538 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 CYP4A22Q5TCH4 519 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 NCAPH2Q6IBW4 605 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 TXNDC11Q6PKC3 985 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 CD300LGQ6UXG3 332 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 KBTBD6Q86V97 674 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 POTEDQ86YR6 584 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 MFSD6LQ8IWD5 586 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 HS6ST3Q8IZP7 471 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms