RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PON1P27169 355 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 GTF2H1P32780 548 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 GATMP50440 423 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 RAB27AP51159 221 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 FAM189BP81408 668 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 POU5F1Q01860 360 aaKnown RBP8.68□□□□□ -1.02
PCDH9-205ENST00000614931 SOX4Q06945 474 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-205ENST00000614931 NCBP1Q09161 790 aaKnown RBP8.68□□□□□ -1.02
PCDH9-205ENST00000614931 ARID5BQ14865 1188 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 CLLU1OSQ5K130 101 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 FKBP15Q5T1M5 1219 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 GJB7Q6PEY0 223 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 SV2AQ7L0J3 742 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 APBB1IPQ7Z5R6 666 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-205ENST00000614931 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-205ENST00000614931 WDR49Q8IV35 697 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 ARHGEF19Q8IW93 802 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 C1orf127Q8N9H9 656 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 GSTCDQ8NEC7 633 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 C18orf25Q96B23 403 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-205ENST00000614931 PI4K2AQ9BTU6 479 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 INTS2Q9H0H0 1204 aaKnown RBP8.68□□□□□ -1.02
PCDH9-205ENST00000614931 ASB7Q9H672 318 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.68□□□□□ -1.021e-6■■■■■ 142.8
PCDH9-205ENST00000614931 GCNT4Q9P109 453 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 CACNG4Q9UBN1 327 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 TUBGCP4Q9UGJ1 667 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 SIX4Q9UIU6 781 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 COQ4Q9Y3A0 265 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 ITIH6Q6UXX5 1313 aa8.68□□□□□ -1.02
PCDH9-205ENST00000614931 SMIM28A0A1B0GU29 152 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 GTPBP10A4D1E9 387 aaKnown RBP8.67□□□□□ -1.02
PCDH9-205ENST00000614931 PPEF2O14830 753 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 B4GALT3O60512 393 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 TPM2P07951 284 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 FGFR1P11362 822 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 BMP1P13497 986 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 KCNE1P15382 129 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 IGFBP6P24592 240 aaPredicted RBP8.67□□□□□ -1.02
PCDH9-205ENST00000614931 MLH1P40692 756 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 SCNN1GP51170 649 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 TFAMQ00059 246 aaKnown RBP8.67□□□□□ -1.02
PCDH9-205ENST00000614931 TFF2Q03403 129 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 CCDC173Q0VFZ6 552 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 GPM6BQ13491 265 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 TMEM132DQ14C87 1099 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 SKIV2LQ15477 1246 aaKnown RBP8.67□□□□□ -1.02
PCDH9-205ENST00000614931 SURF1Q15526 300 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 NAB2Q15742 525 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 ZBTB6Q15916 424 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 KYAT1Q16773 422 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 EXOC3L4Q17RC7 722 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 AAK1Q2M2I8 961 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 PRRC2BQ5JSZ5 2229 aaKnown RBP8.67□□□□□ -1.02
PCDH9-205ENST00000614931 KRT39Q6A163 491 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 SPOPLQ6IQ16 392 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 TRIM65Q6PJ69 517 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 GBP6Q6ZN66 633 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 SLC24A5Q71RS6 500 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 TRAPPC11Q7Z392 1133 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 NPAS4Q8IUM7 802 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 GPIHBP1Q8IV16 184 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 FIBCD1Q8N539 461 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 RNF169Q8NCN4 708 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 EHBP1Q8NDI1 1231 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 CLP1Q92989 425 aaKnown RBP8.67□□□□□ -1.02
PCDH9-205ENST00000614931 KAT5Q92993 513 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 TATDN2Q93075 761 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 MRPL38Q96DV4 380 aaKnown RBP8.67□□□□□ -1.02
PCDH9-205ENST00000614931 KIF12Q96FN5 646 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 PPP1R10Q96QC0 940 aaKnown RBP8.67□□□□□ -1.02
PCDH9-205ENST00000614931 GAD1Q99259 594 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 GOLGA2P5Q9HBQ8 144 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 APOBEC3GQ9HC16 384 aaKnown RBP8.67□□□□□ -1.02
PCDH9-205ENST00000614931 FAM207AQ9NSI2 230 aaPredicted RBP8.67□□□□□ -1.02
PCDH9-205ENST00000614931 COG5Q9UP83 839 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 FHOD1Q9Y613 1164 aa8.67□□□□□ -1.02
PCDH9-205ENST00000614931 ARL5CA6NH57 179 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 P4HA2O15460 535 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 STX10O60499 249 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 N4BP1O75113 896 aaKnown RBP8.66□□□□□ -1.02
PCDH9-205ENST00000614931 OFD1O75665 1012 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 CST3P01034 146 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-205ENST00000614931 RB1P06400 928 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 TPM3P06753 285 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 TMEM191BP0C7N4 346 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 DEKP35659 375 aaKnown RBP8.66□□□□□ -1.02
PCDH9-205ENST00000614931 BMPR1AP36894 532 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 PIK3CAP42336 1068 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 YARSP54577 528 aaKnown RBP8.66□□□□□ -1.02
PCDH9-205ENST00000614931 MYL6P60660 151 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 LRMPQ12912 555 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 BIRC3Q13489 604 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 BTG3Q14201 252 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-205ENST00000614931 HSP90AA2PQ14568 343 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-205ENST00000614931 PTPROQ16827 1216 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 KLHDC7AQ5VTJ3 777 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 E4F1Q66K89 784 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-205ENST00000614931 SPECC1LQ69YQ0 1117 aa8.66□□□□□ -1.02
PCDH9-205ENST00000614931 PHLDB3Q6NSJ2 640 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms