RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 HIF1AQ16665 826 aa15.52■□□□□ 0.08
SNPH-203ENST00000614659 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNPH-203ENST00000614659 C1orf54Q8WWF1 131 aa15.52■□□□□ 0.08
SNPH-203ENST00000614659 ERP44Q9BS26 406 aa15.52■□□□□ 0.08
SNPH-203ENST00000614659 SMYD2Q9NRG4 433 aa15.52■□□□□ 0.08
SNPH-203ENST00000614659 SYNPO2Q9UMS6 1093 aa15.52■□□□□ 0.08
SNPH-203ENST00000614659 SLC26A2P50443 739 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 ARFIP2P53365 341 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 OAZ1P54368 228 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 BCAR1P56945 870 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 HEATR6Q6AI08 1181 aaKnown RBP15.52■□□□□ 0.07
SNPH-203ENST00000614659 SPATA21Q7Z572 469 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 TPCN2Q8NHX9 752 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 GMCL1Q96IK5 515 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 WDR91A4D1P6 747 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 APOL1O14791 398 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 DDNO94850 711 aaPredicted RBP15.52■□□□□ 0.07
SNPH-203ENST00000614659 CSPG5O95196 566 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 SLC9A1P19634 815 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 ARSEP51690 589 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 KDM7AQ6ZMT4 941 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 LRRC43Q8N309 656 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 RTFDC1Q9BY42 306 aaPredicted RBP15.52■□□□□ 0.07
SNPH-203ENST00000614659 BAG5Q9UL15 447 aa15.52■□□□□ 0.07
SNPH-203ENST00000614659 GPR182O15218 404 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 AP5Z1O43299 807 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 ZC3H11AO75152 810 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNPH-203ENST00000614659 RBP5P82980 135 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 DCAF4L1Q3SXM0 396 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 A0A0G2JND7 137 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 PRAMEF18Q5VWM3 479 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 ACAD11Q709F0 780 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 NOA1Q8NC60 698 aaKnown RBP15.51■□□□□ 0.07
SNPH-203ENST00000614659 KLHL8Q9P2G9 620 aaPredicted RBP15.51■□□□□ 0.07
SNPH-203ENST00000614659 SLC37A4O43826 429 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 CHEK2O96017 543 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 XPO6Q96QU8 1125 aaKnown RBP15.51■□□□□ 0.07
SNPH-203ENST00000614659 CCT8L2Q96SF2 557 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 CYTH2Q99418 400 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 MRIQ9BWK5 157 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 FUT8Q9BYC5 575 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 GTF3C4Q9UKN8 822 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 KLK7P49862 253 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 GUCY1A3Q02108 690 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 TMED1Q13445 227 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 ACTRT1Q8TDG2 376 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 FRMD8Q9BZ67 464 aaPredicted RBP15.51■□□□□ 0.07
SNPH-203ENST00000614659 PPARGC1AQ9UBK2 798 aaKnown RBP15.51■□□□□ 0.07
SNPH-203ENST00000614659 KNDC1Q76NI1 1749 aa15.51■□□□□ 0.07
SNPH-203ENST00000614659 KLRC1P26715 233 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 ZNF394Q53GI3 561 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 PPP6R3Q5H9R7 873 aaPredicted RBP15.5■□□□□ 0.07
SNPH-203ENST00000614659 TEDDM1Q5T9Z0 273 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 SPATA2LQ8IUW3 424 aaPredicted RBP15.5■□□□□ 0.07
SNPH-203ENST00000614659 TMX2Q9Y320 296 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 MAPTP10636 758 aaKnown RBP15.5■□□□□ 0.07
SNPH-203ENST00000614659 COPS2P61201 443 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 PDCD2Q16342 344 aaPredicted RBP15.5■□□□□ 0.07
SNPH-203ENST00000614659 EFHC2Q5JST6 749 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 KIRREL3Q8IZU9 778 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 MAGEB5Q9BZ81 275 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 ATRNO75882 1429 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 ILDR1Q86SU0 546 aaPredicted RBP15.5■□□□□ 0.07
SNPH-203ENST00000614659 DNERQ8NFT8 737 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 ZKSCAN4Q969J2 545 aaPredicted RBP15.5■□□□□ 0.07
SNPH-203ENST00000614659 ZIM3Q96PE6 472 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 MON2Q7Z3U7 1717 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 MSH4O15457 936 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 NCF2P19878 526 aaPredicted RBP15.5■□□□□ 0.07
SNPH-203ENST00000614659 EMC2Q15006 297 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 SKA2Q8WVK7 121 aaPredicted RBP15.5■□□□□ 0.07
SNPH-203ENST00000614659 UPF3AQ9H1J1 476 aaKnown RBP15.5■□□□□ 0.07
SNPH-203ENST00000614659 AGPAT3Q9NRZ7 376 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 ANGPTL3Q9Y5C1 460 aa15.5■□□□□ 0.07
SNPH-203ENST00000614659 PSMD3O43242 534 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 KIF1CO43896 1103 aaKnown RBP15.49■□□□□ 0.07
SNPH-203ENST00000614659 SERPINB9P50453 376 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 FAM102AQ5T9C2 384 aaPredicted RBP15.49■□□□□ 0.07
SNPH-203ENST00000614659 C18orf8Q96DM3 657 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 COLEC11Q9BWP8 271 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 PSMC3IPQ9P2W1 217 aaPredicted RBP15.49■□□□□ 0.07
SNPH-203ENST00000614659 A8MXQ7 604 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 PSTPIP1O43586 416 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 YY1P25490 414 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 CDR2Q01850 454 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 NOTUMQ6P988 496 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 RBBP8NLQ8NC74 664 aaPredicted RBP15.49■□□□□ 0.07
SNPH-203ENST00000614659 AFG1LQ8WV93 481 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 SEPT8Q92599 483 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 KIAA1683Q9H0B3 1180 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 TRABDQ9H4I3 376 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 KLC4Q9NSK0 619 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 PPP1R12AO14974 1030 aaPredicted RBP15.49■□□□□ 0.07
SNPH-203ENST00000614659 CREB3O43889 395 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 MSCO60682 206 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 FGFR4P22455 802 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 PON1P27169 355 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 HERVK_113P62684 666 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 SV2CQ496J9 727 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms