RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 URGCPQ8TCY9 931 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 CCDC127Q96BQ5 260 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 ZNF689Q96CS4 500 aaPredicted RBP6.72□□□□□ -1.33
CBWD3-210ENST00000614398 KIF12Q96FN5 646 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 BCO2Q9BYV7 579 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 XYLT2Q9H1B5 865 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 CYP3A43Q9HB55 503 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 GDAP2Q9NXN4 497 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 DPP3Q9NY33 737 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 APEX2Q9UBZ4 518 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 TET1Q8NFU7 2136 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 GOLGA6L6A8MZA4 724 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 THP07101 528 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 DLATP10515 647 aaKnown RBP6.72□□□□□ -1.33
CBWD3-210ENST00000614398 WDR5P61964 334 aaKnown RBP6.72□□□□□ -1.33
CBWD3-210ENST00000614398 HTRA4P83105 476 aaPredicted RBP6.72□□□□□ -1.33
CBWD3-210ENST00000614398 ZBED6P86452 979 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 NCOA4Q13772 614 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 NOMO2Q5JPE7 1267 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 CNGA4Q8IV77 575 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 C7orf61Q8IZ16 206 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 CCDC150Q8NCX0 1101 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 NEK11Q8NG66 645 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 TAS1R2Q8TE23 839 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 BAP1Q92560 729 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 TOP1MTQ969P6 601 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 EEF2KMTQ96G04 330 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 NT5C1BQ96P26 610 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 CASD1Q96PB1 797 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 PANX2Q96RD6 677 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 RPS6KC1Q96S38 1066 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 SLC9A7Q96T83 725 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 DNAJC7Q99615 494 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 PLCD4Q9BRC7 762 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 MTMR12Q9C0I1 747 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 PARP2Q9UGN5 583 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 PCDHB7Q9Y5E2 793 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 NR2E3Q9Y5X4 410 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 ATP8B3O60423 1300 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 ARHGEF37A1IGU5 675 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 EVI5O60447 810 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 DGKIO75912 1065 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 GYPCP04921 128 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 TPM1P09493 284 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 CSF2RAP15509 400 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 PIK3CAP42336 1068 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 YWHAEP62258 255 aaKnown RBP6.71□□□□□ -1.33
CBWD3-210ENST00000614398 SEZ6Q53EL9 994 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 HSP90AA4PQ58FG1 418 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 TMEM240Q5SV17 173 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 C9orf57Q5W0N0 161 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 DPH6Q7L8W6 267 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 EGFL6Q8IUX8 553 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 GPR65Q8IYL9 337 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 TNS4Q8IZW8 715 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 SP7Q8TDD2 431 aaPredicted RBP6.71□□□□□ -1.33
CBWD3-210ENST00000614398 HELQQ8TDG4 1101 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 SEMA4DQ92854 862 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 MYCBPQ99417 103 aaPredicted RBP6.71□□□□□ -1.33
CBWD3-210ENST00000614398 LSM14BQ9BX40 385 aaKnown RBP6.71□□□□□ -1.33
CBWD3-210ENST00000614398 STK33Q9BYT3 514 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 MTIF3Q9H2K0 278 aaKnown RBP6.71□□□□□ -1.33
CBWD3-210ENST00000614398 STK39Q9UEW8 545 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 HES2Q9Y543 173 aa6.71□□□□□ -1.33
CBWD3-210ENST00000614398 CEP350Q5VT06 3117 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 KIAA0100Q14667 2235 aaKnown RBP6.71□□□□□ -1.34
CBWD3-210ENST00000614398 MFAP3LO75121 409 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 TACC1O75410 805 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 EFEMP2O95967 443 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 FGBP02675 491 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 P4HA1P13674 534 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 UCHL3P15374 230 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 AKAP5P24588 427 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 MLH1P40692 756 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 OSTNP61366 133 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 TFAMQ00059 246 aaKnown RBP6.71□□□□□ -1.34
CBWD3-210ENST00000614398 INCA1Q0VD86 236 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 MEA1Q16626 185 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 SV2CQ496J9 727 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 WDR44Q5JSH3 913 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 C16orf59Q7L2K0 433 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 COLGALT2Q8IYK4 626 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 LRRC43Q8N309 656 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 ANKRD7Q92527 254 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 SHC3Q92529 594 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 BADQ92934 168 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 GAD1Q99259 594 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 POP1Q99575 1024 aaKnown RBP6.71□□□□□ -1.34
CBWD3-210ENST00000614398 IMPG2Q9BZV3 1241 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 NIF3L1Q9GZT8 377 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 PRDM5Q9NQX1 630 aaPredicted RBP6.71□□□□□ -1.34
CBWD3-210ENST00000614398 AIPL1Q9NZN9 384 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 LRFN2Q9ULH4 789 aa6.71□□□□□ -1.34
CBWD3-210ENST00000614398 GFPT2O94808 682 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 SLC9A1P19634 815 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 PRKCIP41743 596 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 KCNJ6P48051 423 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 ZNF132P52740 706 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 MFAP3P55082 362 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 NOP14P78316 857 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms