RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 C2CD2LO14523 706 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 LINC01565O15544 149 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 BMP6P22004 513 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 BRCC3P46736 316 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 GLUD2P49448 558 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 DSG1Q02413 1049 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 BMS1Q14692 1282 aaKnown RBP12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 CTC1Q2NKJ3 1217 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 USP41Q3LFD5 358 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 ZCWPW2Q504Y3 356 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 COBLL1Q53SF7 1204 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 RTP2Q5QGT7 225 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 FAM171A1Q5VUB5 890 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 ISM2Q6H9L7 571 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 NT5DC4Q86YG4 428 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 SLC9A9Q8IVB4 645 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 BEST2Q8NFU1 509 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 KHSRPQ92945 711 aaKnown RBP eCLIP12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 PABPC5Q96DU9 382 aaKnown RBP12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 IGFLR1Q9H665 355 aa12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 MRPL17Q9NRX2 175 aaKnown RBP12.27□□□□□ -0.45
CCL3L3-201ENST00000612839 SCN1AP35498 2009 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 PTPRJQ12913 1337 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 ANO9A1A5B4 782 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 I3L4J1 428 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 PIRO00625 290 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 PPEF2O14830 753 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 CALUO43852 315 aaPredicted RBP12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 EXOC3O60645 756 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 GLP2RO95838 553 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 NR3C1P04150 777 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 URODP06132 367 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 CA8P35219 290 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 LTBRP36941 435 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 RBM10P98175 930 aaKnown RBP12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 ADAM15Q13444 863 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 KCNC3Q14003 757 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 NFIL3Q16649 462 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 C9orf57Q5W0N0 161 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 KIAA1841Q6NSI8 718 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 VN1R2Q8NFZ6 395 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 FAM84AQ96KN4 292 aa12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 CDCA3Q99618 268 aaPredicted RBP12.26□□□□□ -0.45
CCL3L3-201ENST00000612839 BRWD1Q9NSI6 2320 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 PLXNA3P51805 1871 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 TULP1O00294 542 aaPredicted RBP12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 BIN1O00499 593 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 TRAPPC3O43617 180 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 NCK2O43639 380 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 CNPP09543 421 aaKnown RBP12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 FGFR3P22607 806 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 CASP4P49662 377 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 TFAMQ00059 246 aaKnown RBP12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 TFF2Q03403 129 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 DLX2Q07687 328 aaPredicted RBP12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 CYP24A1Q07973 514 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 ELAVL2Q12926 359 aaKnown RBP12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 MORC3Q14149 939 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 MYBPC2Q14324 1141 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 SCARA3Q6AZY7 606 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 CENPPQ6IPU0 288 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 CEP57Q86XR8 500 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 GPR65Q8IYL9 337 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 ADSSL1Q8N142 457 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 EFHBQ8N7U6 833 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 CXorf38Q8TB03 319 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 LNX1Q8TBB1 728 aaPredicted RBP12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 GPT2Q8TD30 523 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 RIN2Q8WYP3 895 aaPredicted RBP12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 HLA-CQ95604 372 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 MFSD14AQ96MC6 490 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 KLHL5Q96PQ7 755 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 TTPALQ9BTX7 342 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 GZF1Q9H116 711 aaPredicted RBP12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 CLSTN2Q9H4D0 955 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 UBE2ZQ9H832 354 aaPredicted RBP12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 RXFP1Q9HBX9 757 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 DPP3Q9NY33 737 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 CLDND1Q9NY35 253 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 KIAA1468Q9P260 1216 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 THEGQ9P2T0 379 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 SSX2IPQ9Y2D8 614 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 NUB1Q9Y5A7 615 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 HCFC2Q9Y5Z7 792 aa12.25□□□□□ -0.45
CCL3L3-201ENST00000612839 GOLGA6L22H0YM25 854 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 TEX28O15482 410 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 CLASP2O75122 1294 aaKnown RBP12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 TBX10O75333 385 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 NR2F2P24468 414 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 TKTP29401 623 aaKnown RBP12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 MCM4P33991 863 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 AARSP49588 968 aaKnown RBP eCLIP12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 PMS1P54277 932 aaKnown RBP12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 PSMD6Q15008 389 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 SURF1Q15526 300 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 LMBRD2Q68DH5 695 aaPredicted RBP12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 PRSS55Q6UWB4 352 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms