RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ZNF653Q96CK0 615 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 SAAL1Q96ER3 474 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 PCYT2Q99447 389 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 TMEM109Q9BVC6 243 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 PPANQ9NQ55 473 aaKnown RBP15.7■□□□□ 0.1
CDH1-213ENST00000612417 RAB20Q9NX57 234 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 MTRF1LQ9UGC7 380 aaKnown RBP15.7■□□□□ 0.1
CDH1-213ENST00000612417 CPA4Q9UI42 421 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 IGKV6D-21A0A0A0MT36 114 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 FAM170AA1A519 330 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 SPOPO43791 374 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 ZC3H11AO75152 810 aaKnown RBP eCLIP15.69■□□□□ 0.1
CDH1-213ENST00000612417 TMOD1P28289 359 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 COILP38432 576 aaPredicted RBP15.69■□□□□ 0.1
CDH1-213ENST00000612417 CDR1P51861 262 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 RTP1P59025 263 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 GCNT1Q02742 428 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 CYP24A1Q07973 514 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 PLEKHH3Q7Z736 793 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 ABRAQ8N0Z2 381 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 TAS1R2Q8TE23 839 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 IFT74Q96LB3 600 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 FAM81BQ96LP2 452 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 KIFC3Q9BVG8 833 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 LRRC4CQ9HCJ2 640 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 ACP6Q9NPH0 428 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 MANSC4A6NHS7 340 aaPredicted RBP15.69■□□□□ 0.1
CDH1-213ENST00000612417 CAND2O75155 1236 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 RWDD2BP57060 319 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 DRP2Q13474 957 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 EMC2Q15006 297 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 HSDL1Q3SXM5 330 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 ACAD10Q6JQN1 1059 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 RGMBQ6NW40 437 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 CCDC62Q6P9F0 684 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 PSPC1Q8WXF1 523 aaKnown RBP15.69■□□□□ 0.1
CDH1-213ENST00000612417 RNF25Q96BH1 459 aaPredicted RBP15.69■□□□□ 0.1
CDH1-213ENST00000612417 CCDC127Q96BQ5 260 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 GPR20Q99678 358 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 POLR3FQ9H1D9 316 aaPredicted RBP15.69■□□□□ 0.1
CDH1-213ENST00000612417 LRRC19Q9H756 370 aa15.69■□□□□ 0.1
CDH1-213ENST00000612417 SHBGP04278 402 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 GARTP22102 1010 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 MARK3P27448 753 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 MAPK4P31152 587 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 SLMAPQ14BN4 828 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 TAF1CQ15572 869 aaPredicted RBP15.68■□□□□ 0.1
CDH1-213ENST00000612417 CLEC16AQ2KHT3 1053 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 SAPCD2Q86UD0 394 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 BSNDQ8WZ55 320 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 RAPGEF5Q92565 580 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 ART4Q93070 314 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 PLVAPQ9BX97 442 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 NIFKQ9BYG3 293 aaKnown RBP15.68■□□□□ 0.1
CDH1-213ENST00000612417 XPNPEP1Q9NQW7 623 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 PDLIM7Q9NR12 457 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 CHORDC1Q9UHD1 332 aaPredicted RBP15.68■□□□□ 0.1
CDH1-213ENST00000612417 PASKQ96RG2 1323 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 DOCK3Q8IZD9 2030 aa15.68■□□□□ 0.1
CDH1-213ENST00000612417 IGF2BP3O00425 579 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDH1-213ENST00000612417 RARAP10276 462 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 ABCD1P33897 745 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
CDH1-213ENST00000612417 TMEM63BQ5T3F8 832 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 SV2AQ7L0J3 742 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 GPD1LQ8N335 351 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 SLC7A3Q8WY07 619 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 TMEM143Q96AN5 459 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 POP1Q99575 1024 aaKnown RBP15.67■□□□□ 0.1
CDH1-213ENST00000612417 KCNG1Q9UIX4 513 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 SIP14410 1827 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 TCRBV7S2A1N4TA0A589 114 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 FSCN2O14926 492 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 RARGP13631 454 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 MMP13P45452 471 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 ADCY2Q08462 1091 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 GRB14Q14449 540 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 ERMARDQ5T6L9 678 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 C15orf39Q6ZRI6 1047 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 TRIM50Q86XT4 487 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 POMGNT1Q8WZA1 660 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 KAT2BQ92831 832 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 TATDN2Q93075 761 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 BTBD6Q96KE9 485 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 VTA1Q9NP79 307 aa15.67■□□□□ 0.1
CDH1-213ENST00000612417 AVENQ9NQS1 362 aaPredicted RBP15.67■□□□□ 0.1
CDH1-213ENST00000612417 TOPORSQ9NS56 1045 aaPredicted RBP15.67■□□□□ 0.1
CDH1-213ENST00000612417 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.67■□□□□ 0.1
CDH1-213ENST00000612417 DDX20Q9UHI6 824 aaKnown RBP15.67■□□□□ 0.1
CDH1-213ENST00000612417 ADGRA3Q8IWK6 1321 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 UNGP13051 313 aaPredicted RBP15.66■□□□□ 0.1
CDH1-213ENST00000612417 CLDN10P78369 228 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 SLC29A2Q14542 456 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 PLCB4Q15147 1175 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 ZNF568Q3ZCX4 644 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 C6orf118Q5T5N4 469 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 ZNF677Q86XU0 584 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 CPNE8Q86YQ8 564 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 CCDC105Q8IYK2 499 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 KCNN1Q92952 543 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms