RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 BTNL10A8MVZ5 291 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 ARPC4P59998 168 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 PPP3CAQ08209 521 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 CBX3Q13185 183 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 SLC29A2Q14542 456 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 LRRC14Q15048 493 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 C10orf76Q5T2E6 689 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZCCHC8Q6NZY4 707 aaKnown RBP11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 LLGL2Q6P1M3 1020 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 CCDC121Q6ZUS5 278 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZNF720Q7Z2F6 126 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 CD302Q8IX05 232 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZDHHC14Q8IZN3 488 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 SYCE1Q8N0S2 351 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZBTB8BQ8NAP8 495 aaPredicted RBP11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 EPS8L3Q8TE67 593 aaKnown RBP11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 SLC5A5Q92911 643 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 TSC22D3Q99576 134 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 AZI2Q9H6S1 392 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 PAIP2BQ9ULR5 123 aaKnown RBP11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 USP20Q9Y2K6 914 aa11.39□□□□□ -0.59
PCDHGC3-202ENST00000611950 TBKBP1A7MCY6 615 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 P4HA2O15460 535 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 SGPL1O95470 568 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 GAP43P17677 238 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 CLK1P49759 484 aaKnown RBP11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 RGS19P49795 217 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 SOX10P56693 466 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 WASHC5Q12768 1159 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 PPP2R5CQ13362 524 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 NCCRP1Q6ZVX7 275 aaPredicted RBP11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 BZW1Q7L1Q6 419 aaKnown RBP11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 SAMD7Q7Z3H4 446 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 SLFN11Q7Z7L1 901 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 JAMLQ86YT9 394 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 C2orf49Q9BVC5 232 aaPredicted RBP11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 STK33Q9BYT3 514 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 OSBPL7Q9BZF2 842 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 UBE2OQ9C0C9 1292 aaKnown RBP11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 SYNCQ9H7C4 482 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 TUFT1Q9NNX1 390 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 HAUS2Q9NVX0 235 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 DBR1Q9UK59 544 aaKnown RBP11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 TMX2Q9Y320 296 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 CCDC188H7C350 402 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 DNM1LO00429 736 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 MTA2O94776 668 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 POLR2MP0CAP2 368 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 CTAG1AP78358 180 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 SP4Q02446 784 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 BFSP1Q12934 665 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 NOGQ13253 232 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 TTC27Q6P3X3 843 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 CENPTQ96BT3 561 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 HHIPL1Q96JK4 782 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 AASDHPPTQ9NRN7 309 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 TOPORSQ9NS56 1045 aaPredicted RBP11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 GALNT8Q9NY28 637 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 IKBKGQ9Y6K9 419 aa11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 COL2A1P02458 1487 aaPredicted RBP11.38□□□□□ -0.59
PCDHGC3-202ENST00000611950 FRMPD4Q14CM0 1322 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 SPDYE2BA6NHP3 402 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 EIF3DO15371 548 aaKnown RBP eCLIP11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 CYP26A1O43174 497 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 SPDYE6P0CI01 402 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 CHN1P15882 459 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 COMTP21964 271 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 GJC1P36383 396 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 RPL21P46778 160 aaKnown RBP11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 OXCT1P55809 520 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 PABPC1LQ4VXU2 614 aaKnown RBP11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 RUFY4Q6ZNE9 571 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 SLC47A2Q86VL8 602 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 CCDC105Q8IYK2 499 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 DAW1Q8N136 415 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 IL31RAQ8NI17 732 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 DHX38Q92620 1227 aaKnown RBP11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 SEC16BQ96JE7 1060 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 PWWP2AQ96N64 755 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 IP6K2Q9UHH9 426 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 PGAP2Q9UHJ9 254 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 HERC5Q9UII4 1024 aaKnown RBP11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 SLC30A1Q9Y6M5 507 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 LINC00854A0A1B0GVQ3 168 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 TRAPPC3O43617 180 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 SPOPO43791 374 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 ACSL3O95573 720 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 LINGO3P0C6S8 592 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 DLATP10515 647 aaKnown RBP11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 CEP55Q53EZ4 464 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 CCBE1Q6UXH8 406 aaPredicted RBP11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 WDR75Q8IWA0 830 aaKnown RBP11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 RASGEF1CQ8N431 466 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 ARFGAP2Q8N6H7 521 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 GBP7Q8N8V2 638 aaPredicted RBP11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 C1orf54Q8WWF1 131 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 SREK1Q8WXA9 508 aaKnown RBP11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 AGPAT1Q99943 283 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 ERP44Q9BS26 406 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms