RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 FBXL13Q8NEE6 735 aa13□□□□□ -0.33
CLK4-215ENST00000611733 HASPINQ8TF76 798 aa13□□□□□ -0.33
CLK4-215ENST00000611733 FAM193BQ96PV7 902 aaPredicted RBP13□□□□□ -0.33
CLK4-215ENST00000611733 TRIM5Q9C035 493 aa13□□□□□ -0.33
CLK4-215ENST00000611733 XYLT2Q9H1B5 865 aa13□□□□□ -0.33
CLK4-215ENST00000611733 MTIF3Q9H2K0 278 aaKnown RBP13□□□□□ -0.33
CLK4-215ENST00000611733 APOBEC3GQ9HC16 384 aaKnown RBP13□□□□□ -0.33
CLK4-215ENST00000611733 SLC38A7Q9NVC3 462 aa13□□□□□ -0.33
CLK4-215ENST00000611733 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
CLK4-215ENST00000611733 PRG3Q9Y2Y8 225 aaPredicted RBP13□□□□□ -0.33
CLK4-215ENST00000611733 RALGAPA2Q2PPJ7 1873 aa13□□□□□ -0.33
CLK4-215ENST00000611733 FNDC1Q4ZHG4 1894 aaPredicted RBP13□□□□□ -0.33
CLK4-215ENST00000611733 PODXLO00592 558 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 NRP1O14786 923 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 GALTP07902 379 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 LINC00271P0C7V0 271 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 PON1P27169 355 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 PIK3CAP42336 1068 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 OR1G1P47890 313 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 FILIP1LQ4L180 1135 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 GJB7Q6PEY0 223 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 TMEM173Q86WV6 379 aaPredicted RBP12.99□□□□□ -0.33
CLK4-215ENST00000611733 TSPAN18Q96SJ8 248 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 RAD9AQ99638 391 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 SIX2Q9NPC8 291 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 ITGA11Q9UKX5 1188 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 SIK3Q9Y2K2 1263 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 INSL6Q9Y581 213 aa12.99□□□□□ -0.33
CLK4-215ENST00000611733 I3L4J1 428 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 EPHB6O15197 1021 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 PMM2O15305 246 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 TPM2P07951 284 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 BMP8BP34820 402 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 ZNF75DP51815 510 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 BCAR1P56945 870 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 RBP5P82980 135 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 TRPC3Q13507 836 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 EXOC3L4Q17RC7 722 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 GBP6Q6ZN66 633 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 CMTR2Q8IYT2 770 aaKnown RBP12.98□□□□□ -0.33
CLK4-215ENST00000611733 LRRC43Q8N309 656 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 BCL7CQ8WUZ0 217 aaPredicted RBP12.98□□□□□ -0.33
CLK4-215ENST00000611733 INTS2Q9H0H0 1204 aaKnown RBP12.98□□□□□ -0.33
CLK4-215ENST00000611733 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 GCNT4Q9P109 453 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 AJAP1Q9UKB5 411 aaPredicted RBP12.98□□□□□ -0.33
CLK4-215ENST00000611733 NUB1Q9Y5A7 615 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 PDCD11Q14690 1871 aaKnown RBP12.98□□□□□ -0.33
CLK4-215ENST00000611733 XPOTO43592 962 aaKnown RBP12.98□□□□□ -0.33
CLK4-215ENST00000611733 KIF4AO95239 1232 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 PBX1P40424 430 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 BRCC3P46736 316 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 FKBP15Q5T1M5 1219 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 PHLDB3Q6NSJ2 640 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 ARHGEF19Q8IW93 802 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 KAT5Q92993 513 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 HPDLQ96IR7 371 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 MRPL9Q9BYD2 267 aaKnown RBP12.98□□□□□ -0.33
CLK4-215ENST00000611733 POLIQ9UNA4 740 aa12.98□□□□□ -0.33
CLK4-215ENST00000611733 YBX2Q9Y2T7 364 aaKnown RBP12.98□□□□□ -0.33
CLK4-215ENST00000611733 P4HA2O15460 535 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 N4BP1O75113 896 aaKnown RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 B3GAT3O94766 335 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 NOL4O94818 638 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 ADCY5O95622 1261 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 ASS1P00966 412 aaKnown RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 ALDH2P05091 517 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 LILRA4P59901 499 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 TRIM65Q6PJ69 517 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 ERGIC2Q96RQ1 377 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 LSM14BQ9BX40 385 aaKnown RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 MARCH5Q9NX47 278 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 FAN1Q9Y2M0 1017 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 TDRD15B5MCY1 1934 aaKnown RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 GTPBP10A4D1E9 387 aaKnown RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 RNF225M0QZC1 329 aaPredicted RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 RPL9P32969 192 aaKnown RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 SGSM1Q2NKQ1 1148 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 WDR72Q3MJ13 1102 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 TIGD5Q53EQ6 642 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 TDHQ8IZJ6 230 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 FIBCD1Q8N539 461 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 ARID3AQ99856 593 aa12.97□□□□□ -0.33
CLK4-215ENST00000611733 FAM207AQ9NSI2 230 aaPredicted RBP12.97□□□□□ -0.33
CLK4-215ENST00000611733 PDE4DIPQ5VU43 2346 aa12.96□□□□□ -0.33
CLK4-215ENST00000611733 CLSTN1O94985 981 aa12.96□□□□□ -0.33
CLK4-215ENST00000611733 CA3P07451 260 aa12.96□□□□□ -0.33
CLK4-215ENST00000611733 CDH8P55286 799 aa12.96□□□□□ -0.33
CLK4-215ENST00000611733 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
CLK4-215ENST00000611733 DCLRE1AQ6PJP8 1040 aa12.96□□□□□ -0.33
CLK4-215ENST00000611733 KCNT2Q6UVM3 1135 aa12.96□□□□□ -0.33
CLK4-215ENST00000611733 TAS1R1Q7RTX1 841 aa12.96□□□□□ -0.33
CLK4-215ENST00000611733 DDX27Q96GQ7 796 aaKnown RBP12.96□□□□□ -0.33
CLK4-215ENST00000611733 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
CLK4-215ENST00000611733 PBX4Q9BYU1 374 aa12.96□□□□□ -0.33
CLK4-215ENST00000611733 LAMA3Q16787 3333 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms