RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 GRM1Q13255 1194 aa14.54□□□□□ -0.08
NEK3-205ENST00000610828 DHX34Q14147 1143 aaKnown RBP14.54□□□□□ -0.08
NEK3-205ENST00000610828 DUOXA2Q1HG44 320 aa14.54□□□□□ -0.08
NEK3-205ENST00000610828 TTMPQ5BVD1 217 aa14.54□□□□□ -0.08
NEK3-205ENST00000610828 MPZL3Q6UWV2 235 aa14.54□□□□□ -0.08
NEK3-205ENST00000610828 TSHZ1Q6ZSZ6 1077 aa14.54□□□□□ -0.08
NEK3-205ENST00000610828 MON1BQ7L1V2 547 aa14.54□□□□□ -0.08
NEK3-205ENST00000610828 PRELID2Q8N945 189 aa14.54□□□□□ -0.08
NEK3-205ENST00000610828 MAGOHBQ96A72 148 aaKnown RBP14.54□□□□□ -0.08
NEK3-205ENST00000610828 LRRC45Q96CN5 670 aa14.54□□□□□ -0.08
NEK3-205ENST00000610828 LOC102724159A0A0B4J2E5 919 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 TCRBV7S2A1N4TA0A589 114 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 MYO1FO00160 1098 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 PDHXO00330 501 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 CD58P19256 250 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 CHRNA3P32297 505 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 FLT3P36888 993 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 NOMO3P69849 1222 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 ARHGAP1Q07960 439 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 PWP2Q15269 919 aaKnown RBP14.53□□□□□ -0.08
NEK3-205ENST00000610828 LLGL1Q15334 1064 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 JAMLQ86YT9 394 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 ZDHHC14Q8IZN3 488 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 CEP120Q8N960 986 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 ERP44Q9BS26 406 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 FZD8Q9H461 694 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 MINDY3Q9H8M7 445 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 ADAM22Q9P0K1 906 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 CNTN6Q9UQ52 1028 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 PLAAQ9Y263 795 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 EVPLQ92817 2033 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 TMEM191BP0C7N4 346 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 PROZP22891 400 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 HSD17B3P37058 310 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 TRPC3Q13507 836 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 SURF1Q15526 300 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 LIN9Q5TKA1 542 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 TRIM72Q6ZMU5 477 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 SLC13A5Q86YT5 568 aaPredicted RBP14.53□□□□□ -0.08
NEK3-205ENST00000610828 RASAL2Q9UJF2 1139 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 MTUS1Q9ULD2 1270 aa14.53□□□□□ -0.08
NEK3-205ENST00000610828 IQCA1LA6NCM1 817 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 CSDE1O75534 798 aaKnown RBP14.52□□□□□ -0.08
NEK3-205ENST00000610828 LGALS2P05162 132 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 INSRRP14616 1297 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 LAMC2Q13753 1193 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 ZNF394Q53GI3 561 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 EEF1DP3Q658K8 133 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 KCTD16Q68DU8 428 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 CCDC137Q6PK04 289 aaKnown RBP14.52□□□□□ -0.08
NEK3-205ENST00000610828 LEKR1Q6ZMV7 388 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 GTF3C2Q8WUA4 911 aaPredicted RBP14.52□□□□□ -0.08
NEK3-205ENST00000610828 PPP1R16BQ96T49 567 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 PLVAPQ9BX97 442 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 PTPRHQ9HD43 1115 aa14.52□□□□□ -0.08
NEK3-205ENST00000610828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.52□□□□□ -0.08
NEK3-205ENST00000610828 FAM187AA6NFU0 413 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 C22orf31O95567 290 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 HOXC6P09630 235 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 IQCF3P0C7M6 154 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 MBTD1Q05BQ5 628 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 SGSM1Q2NKQ1 1148 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 ZNF792Q3KQV3 632 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 MAP1SQ66K74 1059 aaPredicted RBP14.52□□□□□ -0.09
NEK3-205ENST00000610828 DUPD1Q68J44 220 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 TAPT1Q6NXT6 567 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 MMS22LQ6ZRQ5 1243 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 UBLCP1Q8WVY7 318 aaPredicted RBP14.52□□□□□ -0.09
NEK3-205ENST00000610828 ZNF606Q8WXB4 792 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 NIF3L1Q9GZT8 377 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 IVNS1ABPQ9Y6Y0 642 aa14.52□□□□□ -0.09
NEK3-205ENST00000610828 ASAP2O43150 1006 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 GH1P01241 217 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 ACTN2P35609 894 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 UAP1Q16222 522 aaPredicted RBP14.51□□□□□ -0.09
NEK3-205ENST00000610828 ZNF699Q32M78 642 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 DNAJC21Q5F1R6 531 aaKnown RBP14.51□□□□□ -0.09
NEK3-205ENST00000610828 DAB2IPQ5VWQ8 1189 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 TTC27Q6P3X3 843 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 SCARA5Q6ZMJ2 495 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 EFCAB13Q8IY85 973 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 CCDC105Q8IYK2 499 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 FMO2Q99518 471 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 CISHQ9NSE2 258 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 PCYOX1Q9UHG3 505 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 CCL15-CCL14A0A0B4J2E2 113 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 BTBD19C9JJ37 291 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 ZNF286BP0CG31 522 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 CXCL8P10145 99 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 RARAP10276 462 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 CETPP11597 493 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 ADCYAP1R1P41586 468 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 SLC1A1P43005 524 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 PTGIRP43119 386 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 ZNF132P52740 706 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 DHX9Q08211 1270 aaKnown RBP14.51□□□□□ -0.09
NEK3-205ENST00000610828 CCL15Q16663 113 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 ZSCAN26Q16670 478 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 ZNF484Q5JVG2 852 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 CEP85LQ5SZL2 805 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms