RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 PRPF4O43172 522 aaKnown RBP eCLIP12.67□□□□□ -0.38
TP53-220ENST00000610623 RASA4O43374 803 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 TBX10O75333 385 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 LYNP07948 512 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 SHMT1P34896 483 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 KYNUQ16719 465 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 SH2D4BQ5SQS7 431 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 TCERG1LQ5VWI1 586 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 SYDE1Q6ZW31 735 aaPredicted RBP12.67□□□□□ -0.38
TP53-220ENST00000610623 ZNF365Q70YC5 407 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 KRT35Q92764 455 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 STMN2Q93045 179 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 OLFM3Q96PB7 478 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 MIPEPQ99797 713 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 GNEQ9Y223 722 aaKnown RBP12.67□□□□□ -0.38
TP53-220ENST00000610623 PSME4Q14997 1843 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 A0A1W2PRG0 241 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 FOXO6A8MYZ6 492 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 TDP2O95551 362 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 PLA2G4BP0C869 781 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 CTC1Q2NKJ3 1217 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 LIN52Q52LA3 116 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 ACSBG2Q5FVE4 666 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 DACT2Q5SW24 774 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 ACBD5Q5T8D3 534 aaPredicted RBP12.66□□□□□ -0.38
TP53-220ENST00000610623 RFWD3Q6PCD5 774 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 GJB7Q6PEY0 223 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 DSTYKQ6XUX3 929 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 HS2ST1Q7LGA3 356 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 GPBP1Q86WP2 473 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 DENND1AQ8TEH3 1009 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 SNF8Q96H20 258 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 PIGSQ96S52 555 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 ASCC2Q9H1I8 757 aaPredicted RBP12.66□□□□□ -0.38
TP53-220ENST00000610623 DBNDD1Q9H9R9 158 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 CYLDQ9NQC7 956 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 GALNT8Q9NY28 637 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 EURLQ9NYK6 297 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 TBK1Q9UHD2 729 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 MOXD2PA6NHM9 499 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 A8MXQ7 604 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 SOCS7O14512 581 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 GSC2O15499 205 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 AKAP3O75969 853 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 CYP11B2P19099 503 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 CHKAP35790 457 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 SFSWAPQ12872 951 aaKnown RBP12.66□□□□□ -0.38
TP53-220ENST00000610623 SIX1Q15475 284 aaPredicted RBP12.66□□□□□ -0.38
TP53-220ENST00000610623 TMEM63BQ5T3F8 832 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 GPATCH4Q5T3I0 446 aaKnown RBP12.66□□□□□ -0.38
TP53-220ENST00000610623 RSBN1LQ6PCB5 846 aaPredicted RBP12.66□□□□□ -0.38
TP53-220ENST00000610623 CLNKQ7Z7G1 428 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 RELL1Q8IUW5 271 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 IDI2Q9BXS1 227 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 STK32BQ9NY57 414 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 NINJ2Q9NZG7 142 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 CIDEBQ9UHD4 219 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 SMG5Q9UPR3 1016 aaKnown RBP12.66□□□□□ -0.38
TP53-220ENST00000610623 SCN9AQ15858 1988 aa12.66□□□□□ -0.38
TP53-220ENST00000610623 COL2A1P02458 1487 aaPredicted RBP12.65□□□□□ -0.38
TP53-220ENST00000610623 FAM196BA6NMK8 535 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 KRT36O76013 467 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 MAN1A1P33908 653 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 KCNJ1P48048 391 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 ZNF543Q08ER8 600 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 DRAP1Q14919 205 aaPredicted RBP12.65□□□□□ -0.38
TP53-220ENST00000610623 SLC15A2Q16348 729 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 PHLDB3Q6NSJ2 640 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 NLRP9Q7RTR0 991 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
TP53-220ENST00000610623 MAML1Q92585 1016 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 PRM3Q9NNZ6 103 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 TMEM260Q9NX78 707 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 TBC1D30Q9Y2I9 924 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 PCDHGA4Q9Y5G9 962 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 UMODL1Q5DID0 1318 aa12.65□□□□□ -0.38
TP53-220ENST00000610623 EDIL3O43854 480 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 KRT18P05783 430 aaKnown RBP12.65□□□□□ -0.39
TP53-220ENST00000610623 PYGMP11217 842 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 CETPP11597 493 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 CDK7P50613 346 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 KRT17Q04695 432 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 WDR72Q3MJ13 1102 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 ZC2HC1CQ53FD0 456 aaPredicted RBP12.65□□□□□ -0.39
TP53-220ENST00000610623 FYB2Q5VWT5 728 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 RNF207Q6ZRF8 634 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 SEPT14Q6ZU15 432 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 IWS1Q96ST2 819 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 CPVLQ9H3G5 476 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 DNAJC18Q9H819 358 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 PREBQ9HCU5 417 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 SLCO1B3Q9NPD5 702 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 SENP1Q9P0U3 644 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 ASIC3Q9UHC3 531 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 DNAJC12Q9UKB3 198 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 ANGPTL2Q9UKU9 493 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.39
TP53-220ENST00000610623 FRMPD2Q68DX3 1309 aaPredicted RBP12.64□□□□□ -0.39
TP53-220ENST00000610623 ARFGEF1Q9Y6D6 1849 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms