RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 GSPT2Q8IYD1 628 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 KIAA0319LQ8IZA0 1049 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 SH2D3CQ8N5H7 860 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 FAM156AQ8NDB6 213 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 MDGA1Q8NFP4 955 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 MTFMTQ96DP5 389 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 PRRX2Q99811 253 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 MRI1Q9BV20 369 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 SARGQ9BW04 601 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 C11orf54Q9H0W9 315 aaPredicted RBP5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 ARMT1Q9H993 441 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 PNPOQ9NVS9 261 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 FEZ2Q9UHY8 353 aaPredicted RBP5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 HDAC5Q9UQL6 1122 aa5.42□□□□□ -1.54
SMCHD1-213ENST00000609587 CAPN8A6NHC0 703 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 PJA2O43164 708 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 IPO13O94829 963 aaKnown RBP5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 HRGP04196 525 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 CD1AP06126 327 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 TRIM27P14373 513 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 TYRP14679 529 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 RHCEP18577 417 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 BMP5P22003 454 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 MAN2A2P49641 1150 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 AGFG1P52594 562 aaKnown RBP5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 RABGGTBP53611 331 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 RAP2BP61225 183 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 RAB1AP62820 205 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 NKX6-1P78426 367 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 RHDQ02161 417 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 RRP1BQ14684 758 aaKnown RBP5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 CCDC142Q17RM4 750 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 FLYWCH1Q4VC44 716 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 COBLL1Q53SF7 1204 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 METTL24Q5JXM2 366 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 ANKS6Q68DC2 871 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 CYB5RLQ6IPT4 315 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 SEM1Q6ZVN7 128 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 FAM83AQ86UY5 434 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 XYLT1Q86Y38 959 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 ELOA2Q8IYF1 753 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 DCBLD1Q8N8Z6 715 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 PLBD2Q8NHP8 589 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 SLC35B2Q8TB61 432 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 ST8SIA2Q92186 375 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 SLC35A4Q96G79 324 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 MYOCQ99972 504 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 CPPED1Q9BRF8 314 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 TTPALQ9BTX7 342 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 WDCPQ9H6R7 721 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 L1RE1Q9UN81 338 aa5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 REXO2Q9Y3B8 237 aaKnown RBP5.41□□□□□ -1.54
SMCHD1-213ENST00000609587 A0A088AWK7 358 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 TBKBP1A7MCY6 615 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 PRR5-ARHGAP8B1AHC4 643 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 KIAA0391O15091 583 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 GRM6O15303 877 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 MAP4K4O95819 1239 aaPredicted RBP5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 FTH1P19P0C7X4 201 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 MTHFD1P11586 935 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 SCNN1GP51170 649 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 CLRN1P58418 232 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 KRTAP10-9P60411 292 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 FAM193AP78312 1265 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 GPSM2P81274 684 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 FGL2Q14314 439 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 PLS1Q14651 629 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 KIAA0753Q2KHM9 967 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 PABPC1LQ4VXU2 614 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 DCAF17Q5H9S7 520 aaPredicted RBP5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 NAIF1Q69YI7 327 aaPredicted RBP5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 ZNF529Q6P280 563 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 DARS2Q6PI48 645 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 Q6ZRM9 215 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 DOK3Q7L591 496 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 ULK2Q8IYT8 1036 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 FAM43AQ8N2R8 423 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 LSM14BQ9BX40 385 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 DDX21Q9NR30 783 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 SLC2A4RGQ9NR83 387 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 SLC52A1Q9NWF4 448 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 SLC23A1Q9UHI7 598 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 FAM50BQ9Y247 325 aa5.4□□□□□ -1.54
SMCHD1-213ENST00000609587 XDHP47989 1333 aa5.4□□□□□ -1.55
SMCHD1-213ENST00000609587 TCRBV7S2A1N4TA0A589 114 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 KLRG2A4D1S0 409 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 NT5C1B-RDH14C9J2C7 533 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 F2RL2O00254 374 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 FOXN1O15353 648 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 NBPF7P0C2Y1 421 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 PRDX5P30044 214 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 ADRA1BP35368 520 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 CACNB3P54284 484 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 CRHR2Q13324 411 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 CNN3Q15417 329 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 SAFBQ15424 915 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 BMT2Q1RMZ1 405 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 DACT2Q5SW24 774 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 C1QL3Q5VWW1 255 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 MAEAQ7L5Y9 396 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms