RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 FIBCD1Q8N539 461 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 ANKRD20A12PQ8NF67 263 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 TAS1R2Q8TE23 839 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 HASPINQ8TF76 798 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 CACTINQ8WUQ7 758 aaKnown RBP8.29□□□□□ -1.08
MSH6-211ENST00000606499 BCL7CQ8WUZ0 217 aaPredicted RBP8.29□□□□□ -1.08
MSH6-211ENST00000606499 RSPH1Q8WYR4 309 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 FAM193BQ96PV7 902 aaPredicted RBP8.29□□□□□ -1.08
MSH6-211ENST00000606499 TSPAN18Q96SJ8 248 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 TMEM8AQ9HCN3 771 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 KANSL3Q9P2N6 904 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 ITGA11Q9UKX5 1188 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 AGAP1Q9UPQ3 857 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 COLQQ9Y215 455 aaPredicted RBP8.29□□□□□ -1.08
MSH6-211ENST00000606499 PRG3Q9Y2Y8 225 aaPredicted RBP8.29□□□□□ -1.08
MSH6-211ENST00000606499 ANO9A1A5B4 782 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 LGALS16A8MUM7 142 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 I3L4J1 428 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 NRP1O14786 923 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 SPTLC1O15269 473 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 CLSTN1O94985 981 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 CST3P01034 146 aaPredicted RBP8.28□□□□□ -1.08
MSH6-211ENST00000606499 TPM2P07951 284 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 LRPAP1P30533 357 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 GTF2H1P32780 548 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 AP3M2P53677 418 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 MYL6P60660 151 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 NCOA4Q13772 614 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 EPC2Q52LR7 807 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 PRPF38BQ5VTL8 546 aaKnown RBP8.28□□□□□ -1.08
MSH6-211ENST00000606499 KRT39Q6A163 491 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 SPOPLQ6IQ16 392 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 KCNT2Q6UVM3 1135 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 COLGALT1Q8NBJ5 622 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 SEMA4DQ92854 862 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 UROC1Q96N76 676 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 NAP1L5Q96NT1 182 aaPredicted RBP8.28□□□□□ -1.08
MSH6-211ENST00000606499 C17orf80Q9BSJ5 609 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 CRACR2AQ9BSW2 395 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 PI4K2AQ9BTU6 479 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 PBX4Q9BYU1 374 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 NKX2-4Q9H2Z4 354 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 MARCH5Q9NX47 278 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 IFNKQ9P0W0 207 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 GCNT4Q9P109 453 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 MTUS1Q9ULD2 1270 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 PCDHA11Q9Y5I1 949 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 VWA8A3KMH1 1905 aa8.28□□□□□ -1.08
MSH6-211ENST00000606499 XIRP2A4UGR9 3374 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 A0A1B0GTH6 734 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.27□□□□□ -1.09
MSH6-211ENST00000606499 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.27□□□□□ -1.09
MSH6-211ENST00000606499 LRRC10BA6NIK2 292 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 PIRO00625 290 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 TEX33O43247 280 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 N4BP1O75113 896 aaKnown RBP8.27□□□□□ -1.09
MSH6-211ENST00000606499 B3GAT3O94766 335 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 GALTP07902 379 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 LAG3P18627 525 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 DNAJB2P25686 324 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 RPL9P32969 192 aaKnown RBP8.27□□□□□ -1.09
MSH6-211ENST00000606499 CTNNB1P35222 781 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 BRCC3P46736 316 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 KLK7P49862 253 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 RBP5P82980 135 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 PLCB2Q00722 1185 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 APBA1Q02410 837 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 TAP1Q03518 808 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 TRPC3Q13507 836 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 ZNF699Q32M78 642 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 CD300LGQ6UXG3 332 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 SCARA5Q6ZMJ2 495 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 LRRC52Q8N7C0 313 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 FBXL13Q8NEE6 735 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 CLP1Q92989 425 aaKnown RBP8.27□□□□□ -1.09
MSH6-211ENST00000606499 HPDLQ96IR7 371 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 ZNF560Q96MR9 790 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 ZNF558Q96NG5 402 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 TMEM175Q9BSA9 504 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 XPO4Q9C0E2 1151 aaKnown RBP8.27□□□□□ -1.09
MSH6-211ENST00000606499 INTS2Q9H0H0 1204 aaKnown RBP8.27□□□□□ -1.09
MSH6-211ENST00000606499 XYLT2Q9H1B5 865 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 RTN4Q9NQC3 1192 aaKnown RBP8.27□□□□□ -1.09
MSH6-211ENST00000606499 RAB20Q9NX57 234 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 ADAM28Q9UKQ2 775 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 FAN1Q9Y2M0 1017 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 COQ4Q9Y3A0 265 aa8.27□□□□□ -1.09
MSH6-211ENST00000606499 KPNA7A9QM74 516 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 TMEM189-UBE2V1I3L0A0 370 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 PMM2O15305 246 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 P4HA2O15460 535 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 ASS1P00966 412 aaKnown RBP8.26□□□□□ -1.09
MSH6-211ENST00000606499 ALDH2P05091 517 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 SLC9A1P19634 815 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 ALDH7A1P49419 539 aaKnown RBP8.26□□□□□ -1.09
MSH6-211ENST00000606499 TAF6P49848 677 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 UBASH3AP57075 661 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 LILRA4P59901 499 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 NOP14P78316 857 aaKnown RBP8.26□□□□□ -1.09
MSH6-211ENST00000606499 SMAD3P84022 425 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms