RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 NUB1Q9Y5A7 615 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PCDHGC5Q9Y5F6 944 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 A0A1W2PQ45 241 aaPredicted RBP13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 A0A1W2PQY0 241 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ANKRD62A6NC57 917 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 RCCD1A6NED2 376 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ZNF623O75123 536 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 RTN2O75298 545 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CD4P01730 458 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CHRNA1P02708 482 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 HSPA6P17066 643 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 MYL6P60660 151 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ZNF667Q5HYK9 610 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ZNF569Q5MCW4 686 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CDR2LQ86X02 465 aaPredicted RBP13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 GLYCTKQ8IVS8 523 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TMEM192Q8IY95 271 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 BEST2Q8NFU1 509 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 MYRIPQ8NFW9 859 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CAGE1Q8TC20 777 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 DDX1Q92499 740 aaKnown RBP13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 KAT5Q92993 513 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TRIM11Q96F44 468 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 WDR24Q96S15 920 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PI4K2AQ9BTU6 479 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ERVK-5Q9HDB9 667 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 WBP1LQ9NX94 342 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 GINS2Q9Y248 185 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 R3HCC1Q9Y3T6 440 aaKnown RBP13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 NOC2LQ9Y3T9 749 aaKnown RBP13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 JRKLQ9Y4A0 524 aa13.17□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ARVCFO00192 962 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CYP26A1O43174 497 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 RECQL4O94761 1208 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CST3P01034 146 aaPredicted RBP13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PAEPP09466 180 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 FAM163BP0C2L3 166 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PNMA6AP0CW24 399 aaPredicted RBP13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PRLRP16471 622 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ATF7P17544 494 aaPredicted RBP13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 FGFR4P22455 802 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PAX3P23760 479 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PNPLA4P41247 253 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ASPAP45381 313 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 OSTNP61366 133 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TUBB4BP68371 445 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 FMO1Q01740 532 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 MYO1EQ12965 1108 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 FBXO47Q5MNV8 452 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 NOP9Q86U38 636 aaKnown RBP13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 RHOT2Q8IXI1 618 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SLC35F6Q8N357 371 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 RFFLQ8WZ73 363 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ZNF592Q92610 1267 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ZNF560Q96MR9 790 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 STARD7Q9NQZ5 370 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 DPP3Q9NY33 737 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 NOD1Q9Y239 953 aa13.16□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 MTA2O94776 668 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SGPL1O95470 568 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 LSM8O95777 96 aaKnown RBP13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ITGB3P05106 788 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 MYBL1P10243 752 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 KRT5P13647 590 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 THPOP40225 353 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 INCA1Q0VD86 236 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TWF2Q6IBS0 349 aaKnown RBP13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SLC47A2Q86VL8 602 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 RPUSD2Q8IZ73 545 aaKnown RBP13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 RBBP8NLQ8NC74 664 aaPredicted RBP13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 U2AF1L4Q8WU68 220 aaKnown RBP13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CTNNBL1Q8WYA6 563 aaPredicted RBP13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 VCPIP1Q96JH7 1222 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ZNF518BQ9C0D4 1074 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 NXF3Q9H4D5 531 aaKnown RBP13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 UBN1Q9NPG3 1134 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 FAM105AQ9NUU6 356 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SLC38A7Q9NVC3 462 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SNTG2Q9NY99 539 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 OGDHLQ9ULD0 1010 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 GIT1Q9Y2X7 761 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 IPPQ9Y573 584 aa13.15□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TSC2P49815 1807 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 A0A0U1RQJ8 604 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 FANCGO15287 622 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 INPPL1O15357 1258 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PARNO95453 639 aaKnown RBP13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CYP1A1P04798 512 aaPredicted RBP13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ZSCAN20P17040 1043 aaPredicted RBP13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CHRNB2P17787 502 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 LRPAP1P30533 357 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 USP8P40818 1118 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CDK7P50613 346 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 HTRA3P83110 453 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms