RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ANKRD36BP1Q96IX9 119 aa15□□□□□ -0.01
RNF40-212ENST00000602784 SUSD3Q96L08 255 aa15□□□□□ -0.01
RNF40-212ENST00000602784 DUSP9Q99956 384 aaKnown RBP15□□□□□ -0.01
RNF40-212ENST00000602784 ENTPD7Q9NQZ7 604 aa15□□□□□ -0.01
RNF40-212ENST00000602784 DACH1Q9UI36 760 aa15□□□□□ -0.01
RNF40-212ENST00000602784 NUB1Q9Y5A7 615 aa15□□□□□ -0.01
RNF40-212ENST00000602784 PTPRJQ12913 1337 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 FSD2A1L4K1 749 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 TRIM49BA6NDI0 452 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 C2orf71A6NGG8 1288 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 NCK2O43639 380 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 LILRB3O75022 631 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 URODP06132 367 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 EPB41P11171 864 aaKnown RBP14.99□□□□□ -0.01
RNF40-212ENST00000602784 KRT13P13646 458 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 TNNI1P19237 187 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 FGFR3P22607 806 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 IGFBP6P24592 240 aaPredicted RBP14.99□□□□□ -0.01
RNF40-212ENST00000602784 ERCC5P28715 1186 aaPredicted RBP14.99□□□□□ -0.01
RNF40-212ENST00000602784 IRS1P35568 1242 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 PNPLA4P41247 253 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 LILRA4P59901 499 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 RBP5P82980 135 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 SKOR2Q2VWA4 1001 aaPredicted RBP14.99□□□□□ -0.01
RNF40-212ENST00000602784 FAM171A1Q5VUB5 890 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 KIAA1841Q6NSI8 718 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 PDXDC1Q6P996 788 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.99□□□□□ -0.01
RNF40-212ENST00000602784 TAS1R1Q7RTX1 841 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 FILIP1Q7Z7B0 1213 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 LRRC52Q8N7C0 313 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 OR5B17Q8NGF7 314 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 PLEKHO2Q8TD55 490 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 HASPINQ8TF76 798 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 POP1Q99575 1024 aaKnown RBP14.99□□□□□ -0.01
RNF40-212ENST00000602784 TTPALQ9BTX7 342 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 MTMR12Q9C0I1 747 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 MRPL17Q9NRX2 175 aaKnown RBP14.99□□□□□ -0.01
RNF40-212ENST00000602784 TMEM63CQ9P1W3 806 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 CTNND2Q9UQB3 1225 aa14.99□□□□□ -0.01
RNF40-212ENST00000602784 ARHGEF37A1IGU5 675 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 M0QZQ0 153 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 SYN3O14994 580 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 FGFR1OPO95684 399 aaKnown RBP14.98□□□□□ -0.01
RNF40-212ENST00000602784 GLUD2P49448 558 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 VAMP7P51809 220 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 CREMQ03060 361 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 BFSP1Q12934 665 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 PTPN14Q15678 1187 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 DPCR1Q3MIW9 517 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 SASS6Q6UVJ0 657 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 TRAPPC11Q7Z392 1133 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 CSGALNACT2Q8N6G5 542 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 PIK3R5Q8WYR1 880 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 ZNF516Q92618 1163 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 CDCA3Q99618 268 aaPredicted RBP14.98□□□□□ -0.01
RNF40-212ENST00000602784 RXFP1Q9HBX9 757 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 METTL14Q9HCE5 456 aaKnown RBP14.98□□□□□ -0.01
RNF40-212ENST00000602784 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.98□□□□□ -0.01
RNF40-212ENST00000602784 SIX4Q9UIU6 781 aa14.98□□□□□ -0.01
RNF40-212ENST00000602784 LRRIQ3A6PVS8 624 aaPredicted RBP14.97□□□□□ -0.01
RNF40-212ENST00000602784 HIDE1A8MVS5 230 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 TULP1O00294 542 aaPredicted RBP14.97□□□□□ -0.01
RNF40-212ENST00000602784 PPEF2O14830 753 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 LETM1O95202 739 aaPredicted RBP14.97□□□□□ -0.01
RNF40-212ENST00000602784 GNA14O95837 355 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 C1RP00736 705 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 ITGB3P05106 788 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 POLR2BP30876 1174 aaKnown RBP14.97□□□□□ -0.01
RNF40-212ENST00000602784 GTF2H1P32780 548 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 BRCC3P46736 316 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 TAF6P49848 677 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 COL19A1Q14993 1142 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 TCEAL5Q5H9L2 206 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 C1orf220Q5T0J3 134 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 PLPP4Q5VZY2 271 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 LMBRD2Q68DH5 695 aaPredicted RBP14.97□□□□□ -0.01
RNF40-212ENST00000602784 CAVIN1Q6NZI2 390 aaKnown RBP14.97□□□□□ -0.01
RNF40-212ENST00000602784 FRMD5Q7Z6J6 570 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 TMEM130Q8N3G9 435 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 APPL2Q8NEU8 664 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 MAFAQ8NHW3 353 aaPredicted RBP14.97□□□□□ -0.01
RNF40-212ENST00000602784 EEF2KMTQ96G04 330 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 ZNF560Q96MR9 790 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 MED15Q96RN5 788 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 TLE6Q9H808 572 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 ANO10Q9NW15 660 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 FNIP2Q9P278 1114 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 ARMCX3Q9UH62 379 aaPredicted RBP14.97□□□□□ -0.01
RNF40-212ENST00000602784 PCDHB8Q9UN66 801 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 AGAP1Q9UPQ3 857 aa14.97□□□□□ -0.01
RNF40-212ENST00000602784 R3HCC1Q9Y3T6 440 aaKnown RBP14.97□□□□□ -0.01
RNF40-212ENST00000602784 ATG2AQ2TAZ0 1938 aa14.96□□□□□ -0.01
RNF40-212ENST00000602784 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.96□□□□□ -0.01
RNF40-212ENST00000602784 KPNA7A9QM74 516 aa14.96□□□□□ -0.01
RNF40-212ENST00000602784 STX10O60499 249 aa14.96□□□□□ -0.01
RNF40-212ENST00000602784 C4BPAP04003 597 aaKnown RBP14.96□□□□□ -0.01
RNF40-212ENST00000602784 TYMPP19971 482 aa14.96□□□□□ -0.01
RNF40-212ENST00000602784 STX17P56962 302 aa14.96□□□□□ -0.01
RNF40-212ENST00000602784 DLG4P78352 724 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms