RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 FAM167AQ96KS9 214 aa3.67□□□□□ -1.82
SGMS1-207ENST00000602619 C11orf54Q9H0W9 315 aaPredicted RBP3.67□□□□□ -1.82
SGMS1-207ENST00000602619 LDAHQ9H6V9 325 aa3.67□□□□□ -1.82
SGMS1-207ENST00000602619 ANLNQ9NQW6 1124 aa3.67□□□□□ -1.82
SGMS1-207ENST00000602619 SIDT1Q9NXL6 827 aaKnown RBP3.67□□□□□ -1.82
SGMS1-207ENST00000602619 POLHQ9Y253 713 aa3.67□□□□□ -1.82
SGMS1-207ENST00000602619 PCDHA13Q9Y5I0 950 aa3.67□□□□□ -1.82
SGMS1-207ENST00000602619 COL11A2P13942 1736 aaPredicted RBP3.67□□□□□ -1.82
SGMS1-207ENST00000602619 AHRRA9YTQ3 701 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 KIAA0355O15063 1070 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 PRPF3O43395 683 aaKnown RBP3.66□□□□□ -1.82
SGMS1-207ENST00000602619 OFD1O75665 1012 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 NR4A1P22736 598 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 GCSHP23434 173 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 SLC6A4P31645 630 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 CLK3P49761 638 aaKnown RBP3.66□□□□□ -1.82
SGMS1-207ENST00000602619 MAP2K6P52564 334 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 NOGQ13253 232 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 ATP2B3Q16720 1220 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 PABPC1LQ4VXU2 614 aaKnown RBP3.66□□□□□ -1.82
SGMS1-207ENST00000602619 RABL3Q5HYI8 236 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 ATXN7L2Q5T6C5 722 aaPredicted RBP3.66□□□□□ -1.82
SGMS1-207ENST00000602619 STRIP1Q5VSL9 837 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 EFCAB12Q6NXP0 572 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 TPH2Q8IWU9 490 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 RHOT2Q8IXI1 618 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 GSPT2Q8IYD1 628 aaKnown RBP3.66□□□□□ -1.82
SGMS1-207ENST00000602619 CHPFQ8IZ52 775 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 FUBP1Q96AE4 644 aaKnown RBP3.66□□□□□ -1.82
SGMS1-207ENST00000602619 RGMAQ96B86 450 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 TMX3Q96JJ7 454 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 DCLRE1CQ96SD1 692 aaKnown RBP3.66□□□□□ -1.82
SGMS1-207ENST00000602619 NEU1Q99519 415 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 RLIMQ9NVW2 624 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 DKK2Q9UBU2 259 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 COX11Q9Y6N1 276 aa3.66□□□□□ -1.82
SGMS1-207ENST00000602619 GAGE12BA1L429 117 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 GAGE12HA6NDE8 117 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 DRGXA6NNA5 263 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 PROB1E7EW31 1015 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 LEFTY2O00292 366 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 ERC2O15083 957 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 SLC43A1O75387 559 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 HAUS5O94927 633 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 POMCP01189 267 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 RAP2AP10114 183 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 ALAS1P13196 640 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 HSPA6P17066 643 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 HK1P19367 917 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 MALP21145 153 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 ZFP36P26651 326 aaKnown RBP3.65□□□□□ -1.83
SGMS1-207ENST00000602619 ZNF280AP59817 542 aaPredicted RBP3.65□□□□□ -1.83
SGMS1-207ENST00000602619 NKX6-1P78426 367 aaPredicted RBP3.65□□□□□ -1.83
SGMS1-207ENST00000602619 UBXN2BQ14CS0 331 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 PTPAQ15257 358 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 CCDC181Q5TID7 509 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 EMC10Q5UCC4 262 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 CYB5RLQ6IPT4 315 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 ZNF529Q6P280 563 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 LRRC55Q6ZSA7 311 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 FAM90A1Q86YD7 464 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 ZNF276Q8N554 614 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 C3orf20Q8ND61 904 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 FBXO18Q8NFZ0 1043 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 NLGN4YQ8NFZ3 816 aaPredicted RBP3.65□□□□□ -1.83
SGMS1-207ENST00000602619 PROKR1Q8TCW9 393 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 CLPTM1LQ96KA5 538 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 FAM193BQ96PV7 902 aaPredicted RBP3.65□□□□□ -1.83
SGMS1-207ENST00000602619 MAP3K14Q99558 947 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 MYOCQ99972 504 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 SLC46A2Q9BY10 475 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 EPC1Q9H2F5 836 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 TOR3AQ9H497 397 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 WDCPQ9H6R7 721 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 MAN1C1Q9NR34 630 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 FBXO34Q9NWN3 711 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 JKAMPQ9P055 326 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 GABBR1Q9UBS5 961 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 TCEAL9Q9UHQ7 104 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 FZD1Q9UP38 647 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 HDAC5Q9UQL6 1122 aa3.65□□□□□ -1.83
SGMS1-207ENST00000602619 A0A088AWK7 358 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 F2RL2O00254 374 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 GRM6O15303 877 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 PARNO95453 639 aaKnown RBP3.64□□□□□ -1.83
SGMS1-207ENST00000602619 ANXA1P04083 346 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 ALDH2P05091 517 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 CD1AP06126 327 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 CT47B1P0C2W7 299 aaPredicted RBP3.64□□□□□ -1.83
SGMS1-207ENST00000602619 MTHFD1P11586 935 aaKnown RBP3.64□□□□□ -1.83
SGMS1-207ENST00000602619 PRDX5P30044 214 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 APOBEC3AP31941 199 aaPredicted RBP3.64□□□□□ -1.83
SGMS1-207ENST00000602619 AGFG1P52594 562 aaKnown RBP3.64□□□□□ -1.83
SGMS1-207ENST00000602619 SLFN5Q08AF3 891 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 TCF15Q12870 199 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 SNAPC2Q13487 334 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 GBX1Q14549 363 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 ZNF267Q14586 743 aaPredicted RBP3.64□□□□□ -1.83
SGMS1-207ENST00000602619 FLYWCH1Q4VC44 716 aa3.64□□□□□ -1.83
SGMS1-207ENST00000602619 LY6G5CQ5SRR4 150 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms