RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 SNRPFP62306 86 aaKnown RBP18.14■□□□□ 0.49
SSBP4-213ENST00000602088 DPYDQ12882 1025 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 SNW1Q13573 536 aaKnown RBP18.14■□□□□ 0.49
SSBP4-213ENST00000602088 KNOP1Q1ED39 458 aaKnown RBP18.14■□□□□ 0.49
SSBP4-213ENST00000602088 KANK3Q6NY19 840 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 PALB2Q86YC2 1186 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 GLYCTKQ8IVS8 523 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 BRSK2Q8IWQ3 736 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 NELFCDQ8IXH7 590 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 C12orf76Q8N812 135 aaPredicted RBP18.14■□□□□ 0.49
SSBP4-213ENST00000602088 KIAA0895Q8NCT3 520 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 ENGASEQ8NFI3 743 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 SUSD3Q96L08 255 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 AGPAT3Q9NRZ7 376 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 CHMP5Q9NZZ3 219 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 MTRRQ9UBK8 725 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 TNFRSF10AO00220 468 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 TGM5O43548 720 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 MCM4P33991 863 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 ZP2Q05996 745 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 RARS2Q5T160 578 aaKnown RBP18.13■□□□□ 0.49
SSBP4-213ENST00000602088 CES5AQ6NT32 575 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 ANKS3Q6ZW76 656 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 NT5DC4Q86YG4 428 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 ADHFE1Q8IWW8 467 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 EFCAB13Q8IY85 973 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 NOC3LQ8WTT2 800 aaKnown RBP18.13■□□□□ 0.49
SSBP4-213ENST00000602088 HDAC7Q8WUI4 952 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 CD320Q9NPF0 282 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 RBAKQ9NYW8 714 aaPredicted RBP18.13■□□□□ 0.49
SSBP4-213ENST00000602088 HSPBP1Q9NZL4 362 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 DPP7Q9UHL4 492 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 BACE2Q9Y5Z0 518 aa18.13■□□□□ 0.49
SSBP4-213ENST00000602088 ANO9A1A5B4 782 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 C19orf67A6NJJ6 358 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 M0QZQ0 153 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 PPEF2O14830 753 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 CLIC2O15247 247 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 ADAM12O43184 909 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 RHOBTB3O94955 611 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 SPATA31D3P0C874 917 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 AARSP49588 968 aaKnown RBP eCLIP18.12■□□□□ 0.494e-6■■■■■ 41.6
SSBP4-213ENST00000602088 FAM160A1Q05DH4 1040 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 MRPL58Q14197 206 aaKnown RBP18.12■□□□□ 0.49
SSBP4-213ENST00000602088 CBX2Q14781 532 aaPredicted RBP18.12■□□□□ 0.49
SSBP4-213ENST00000602088 C9orf57Q5W0N0 161 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 ELMSAN1Q6PJG2 1045 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 RSPO2Q6UXX9 243 aaPredicted RBP18.12■□□□□ 0.49
SSBP4-213ENST00000602088 SPATA31D4Q6ZUB0 917 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 HS2ST1Q7LGA3 356 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 PLEKHA4Q9H4M7 779 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 SFXN1Q9H9B4 322 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 KIAA1586Q9HCI6 787 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 MAN1C1Q9NR34 630 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 DPP3Q9NY33 737 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 CGNQ9P2M7 1197 aaKnown RBP18.12■□□□□ 0.49
SSBP4-213ENST00000602088 CDH22Q9UJ99 828 aa18.12■□□□□ 0.49
SSBP4-213ENST00000602088 MTCL1Q9Y4B5 1905 aaKnown RBP18.11■□□□□ 0.49
SSBP4-213ENST00000602088 ZNF233A6NK53 670 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 PIRO00625 290 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 TBC1D4O60343 1298 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 PAX3P23760 479 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 OR1D2P34982 312 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 LILRA4P59901 499 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 RAB33AQ14088 237 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 VARS2Q5ST30 1063 aaKnown RBP18.11■□□□□ 0.49
SSBP4-213ENST00000602088 TMC5Q6UXY8 1006 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 CBWD2Q8IUF1 395 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 GJD3Q8N144 294 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 KREMEN2Q8NCW0 462 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 APPL2Q8NEU8 664 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 CCDC47Q96A33 483 aaKnown RBP18.11■□□□□ 0.49
SSBP4-213ENST00000602088 CCDC34Q96HJ3 373 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 POP1Q99575 1024 aaKnown RBP18.11■□□□□ 0.49
SSBP4-213ENST00000602088 PHF7Q9BWX1 381 aaPredicted RBP18.11■□□□□ 0.49
SSBP4-213ENST00000602088 PDE11AQ9HCR9 933 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 PCDHB8Q9UN66 801 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 CDY1Q9Y6F8 540 aa18.11■□□□□ 0.49
SSBP4-213ENST00000602088 SPDYE4A6NLX3 237 aa18.1■□□□□ 0.49
SSBP4-213ENST00000602088 WEE2P0C1S8 567 aa18.1■□□□□ 0.49
SSBP4-213ENST00000602088 MTHFRP42898 656 aa18.1■□□□□ 0.49
SSBP4-213ENST00000602088 KCNB1Q14721 858 aa18.1■□□□□ 0.49
SSBP4-213ENST00000602088 SLC8B1Q6J4K2 584 aa18.1■□□□□ 0.49
SSBP4-213ENST00000602088 GPR149Q86SP6 731 aa18.1■□□□□ 0.49
SSBP4-213ENST00000602088 C12orf56Q8IXR9 622 aa18.1■□□□□ 0.49
SSBP4-213ENST00000602088 XXYLT1Q8NBI6 393 aa18.1■□□□□ 0.49
SSBP4-213ENST00000602088 CMASQ8NFW8 434 aaPredicted RBP18.1■□□□□ 0.49
SSBP4-213ENST00000602088 FEZF2Q8TBJ5 459 aa18.1■□□□□ 0.49
SSBP4-213ENST00000602088 RIPOR3Q96MK2 946 aa18.1■□□□□ 0.49
SSBP4-213ENST00000602088 H7C4K7 107 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 SPTLC1O15269 473 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 RFPL2O75678 378 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 PAPLNO95428 1278 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 SSTR3P32745 418 aaPredicted RBP18.09■□□□□ 0.49
SSBP4-213ENST00000602088 CYP2J2P51589 502 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 TFAMQ00059 246 aaKnown RBP18.09■□□□□ 0.49
SSBP4-213ENST00000602088 PNOCQ13519 176 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 SURF1Q15526 300 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 SNRNP35Q16560 246 aaKnown RBP18.09■□□□□ 0.49
SSBP4-213ENST00000602088 ATAT1Q5SQI0 421 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms