RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 PDGFBP01127 241 aaPredicted RBP28.31■■■□□ 2.12
PNKP-216ENST00000601816 IDEP14735 1019 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 ARPP19P56211 112 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 MRPL58Q14197 206 aaKnown RBP28.31■■■□□ 2.12
PNKP-216ENST00000601816 CTXN3Q4LDR2 81 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 ZNF280DQ6N043 979 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 TMEM130Q8N3G9 435 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 ZNF461Q8TAF7 563 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 TBC1D7Q9P0N9 293 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 AGO2Q9UKV8 859 aaKnown RBP28.31■■■□□ 2.12
PNKP-216ENST00000601816 STYXL1Q9Y6J8 313 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 MYH15Q9Y2K3 1946 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 TBC1D4O60343 1298 aa28.3■■■□□ 2.12
PNKP-216ENST00000601816 ZSCAN22P10073 491 aaPredicted RBP28.3■■■□□ 2.12
PNKP-216ENST00000601816 ELF1P32519 619 aa28.3■■■□□ 2.12
PNKP-216ENST00000601816 ACOT2P49753 483 aa28.3■■■□□ 2.12
PNKP-216ENST00000601816 NTHL1P78549 312 aa28.3■■■□□ 2.12
PNKP-216ENST00000601816 JADE1Q6IE81 842 aa28.3■■■□□ 2.12
PNKP-216ENST00000601816 BEST2Q8NFU1 509 aa28.3■■■□□ 2.12
PNKP-216ENST00000601816 FBXL5Q9UKA1 691 aa28.3■■■□□ 2.12
PNKP-216ENST00000601816 DUSP12Q9UNI6 340 aa28.3■■■□□ 2.12
PNKP-216ENST00000601816 EXOC7Q9UPT5 735 aa28.3■■■□□ 2.12
PNKP-216ENST00000601816 WDR27A2RRH5 827 aa28.29■■■□□ 2.12
PNKP-216ENST00000601816 GCNT3O95395 438 aa28.29■■■□□ 2.12
PNKP-216ENST00000601816 LAMP2P13473 410 aa28.29■■■□□ 2.12
PNKP-216ENST00000601816 GUCY2FP51841 1108 aa28.29■■■□□ 2.12
PNKP-216ENST00000601816 SPATA1Q5VX52 437 aa28.29■■■□□ 2.12
PNKP-216ENST00000601816 RSAD2Q8WXG1 361 aa28.29■■■□□ 2.12
PNKP-216ENST00000601816 NXPE3Q969Y0 559 aa28.29■■■□□ 2.12
PNKP-216ENST00000601816 STRA6Q9BX79 667 aa28.29■■■□□ 2.12
PNKP-216ENST00000601816 OLFML3Q9NRN5 406 aa28.29■■■□□ 2.12
PNKP-216ENST00000601816 ZFP37Q9Y6Q3 630 aaPredicted RBP28.29■■■□□ 2.12
PNKP-216ENST00000601816 MUC6Q6W4X9 2439 aa28.28■■■□□ 2.12
PNKP-216ENST00000601816 PRRG1O14668 218 aa28.28■■■□□ 2.12
PNKP-216ENST00000601816 ABLIM3O94929 683 aa28.28■■■□□ 2.12
PNKP-216ENST00000601816 VCPP55072 806 aaKnown RBP28.28■■■□□ 2.12
PNKP-216ENST00000601816 POSTNQ15063 836 aa28.28■■■□□ 2.12
PNKP-216ENST00000601816 L1TD1Q5T7N2 865 aaKnown RBP28.28■■■□□ 2.12
PNKP-216ENST00000601816 POMGNT1Q8WZA1 660 aa28.28■■■□□ 2.12
PNKP-216ENST00000601816 ACCSQ96QU6 501 aa28.28■■■□□ 2.12
PNKP-216ENST00000601816 IKZF4Q9H2S9 585 aa28.28■■■□□ 2.12
PNKP-216ENST00000601816 PANK4Q9NVE7 773 aa28.28■■■□□ 2.12
PNKP-216ENST00000601816 DERAQ9Y315 318 aa28.28■■■□□ 2.12
PNKP-216ENST00000601816 FRMD3A2A2Y4 597 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 M0QZQ0 153 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 CUTAO60888 179 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 F13A1P00488 732 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 NFICP08651 508 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 AARSP49588 968 aaKnown RBP eCLIP28.27■■■□□ 2.12
PNKP-216ENST00000601816 YWHAHQ04917 246 aaPredicted RBP28.27■■■□□ 2.12
PNKP-216ENST00000601816 ALCAMQ13740 583 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 TMEM132DQ14C87 1099 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 FOXD4L6Q3SYB3 417 aaPredicted RBP28.27■■■□□ 2.12
PNKP-216ENST00000601816 FOXD4L3Q6VB84 417 aaPredicted RBP28.27■■■□□ 2.12
PNKP-216ENST00000601816 PRRX2Q99811 253 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 ASB7Q9H672 318 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 CDH7Q9ULB5 785 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 PCDHB13Q9Y5F0 798 aa28.27■■■□□ 2.12
PNKP-216ENST00000601816 ARHGEF37A1IGU5 675 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 LRG1P02750 347 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 ATF2P15336 505 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 AVPR2P30518 371 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 KCNA1Q09470 495 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 PABPC1LQ4VXU2 614 aaKnown RBP28.26■■■□□ 2.11
PNKP-216ENST00000601816 IER5LQ5T953 404 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 TPGS2Q68CL5 300 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 DSTYKQ6XUX3 929 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 CCDC65Q8IXS2 484 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 LRRC27Q9C0I9 530 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 TNMDQ9H2S6 317 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 MFSD1Q9H3U5 465 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 CYP4F11Q9HBI6 524 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 HCFC1R1Q9NWW0 138 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 DOCK8Q8NF50 2099 aa28.26■■■□□ 2.11
PNKP-216ENST00000601816 ZDBF2Q9HCK1 2354 aa28.25■■■□□ 2.11
PNKP-216ENST00000601816 ADSSP30520 456 aa28.25■■■□□ 2.11
PNKP-216ENST00000601816 CASP5P51878 434 aa28.25■■■□□ 2.11
PNKP-216ENST00000601816 POU5F1Q01860 360 aaKnown RBP28.25■■■□□ 2.11
PNKP-216ENST00000601816 USP37Q86T82 979 aa28.25■■■□□ 2.11
PNKP-216ENST00000601816 TCEAL8Q8IYN2 117 aa28.25■■■□□ 2.11
PNKP-216ENST00000601816 SPRYD3Q8NCJ5 442 aa28.25■■■□□ 2.11
PNKP-216ENST00000601816 CUEDC2Q9H467 287 aa28.25■■■□□ 2.11
PNKP-216ENST00000601816 DNMT3BQ9UBC3 853 aaKnown RBP28.25■■■□□ 2.11
PNKP-216ENST00000601816 FBXL21Q9UKT6 434 aa28.25■■■□□ 2.11
PNKP-216ENST00000601816 C2CD2Q9Y426 696 aa28.25■■■□□ 2.11
PNKP-216ENST00000601816 TIMM13Q9Y5L4 95 aaPredicted RBP28.25■■■□□ 2.11
PNKP-216ENST00000601816 KMT2EQ8IZD2 1858 aa28.25■■■□□ 2.11
PNKP-216ENST00000601816 ANHXE9PGG2 379 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 PPEF2O14830 753 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 NARSO43776 548 aaKnown RBP28.24■■■□□ 2.11
PNKP-216ENST00000601816 OAZ2O95190 189 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 CPB1P15086 417 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 HTR4Q13639 388 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 E2F4Q16254 413 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 C9orf57Q5W0N0 161 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 SHC4Q6S5L8 630 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 SYCP3Q8IZU3 236 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 SLC44A3Q8N4M1 653 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 ITFG1Q8TB96 612 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 KCNG4Q8TDN1 519 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms