RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SEL1LQ9UBV2 794 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 FBXL5Q9UKA1 691 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 PCDHB8Q9UN66 801 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 TISP43B9A030 160 aa24.64■■□□□ 1.54
SSBP4-209ENST00000601357 H7C4K7 107 aa24.64■■□□□ 1.54
SSBP4-209ENST00000601357 M0QZQ0 153 aa24.64■■□□□ 1.54
SSBP4-209ENST00000601357 SV2BQ7L1I2 683 aa24.64■■□□□ 1.54
SSBP4-209ENST00000601357 SLC44A3Q8N4M1 653 aa24.64■■□□□ 1.54
SSBP4-209ENST00000601357 LINC00301Q8NCQ3 95 aa24.64■■□□□ 1.54
SSBP4-209ENST00000601357 HVCN1Q96D96 273 aa24.64■■□□□ 1.54
SSBP4-209ENST00000601357 RPF1Q9H9Y2 349 aaKnown RBP24.64■■□□□ 1.54
SSBP4-209ENST00000601357 ARHGEF37A1IGU5 675 aa24.63■■□□□ 1.53
SSBP4-209ENST00000601357 NARSO43776 548 aaKnown RBP24.63■■□□□ 1.53
SSBP4-209ENST00000601357 ATF2P15336 505 aa24.63■■□□□ 1.53
SSBP4-209ENST00000601357 TCF15Q12870 199 aa24.63■■□□□ 1.53
SSBP4-209ENST00000601357 HTR4Q13639 388 aa24.63■■□□□ 1.53
SSBP4-209ENST00000601357 CCDC73Q6ZRK6 1079 aa24.63■■□□□ 1.53
SSBP4-209ENST00000601357 CD302Q8IX05 232 aa24.63■■□□□ 1.53
SSBP4-209ENST00000601357 APPL2Q8NEU8 664 aa24.63■■□□□ 1.53
SSBP4-209ENST00000601357 HCFC1R1Q9NWW0 138 aa24.63■■□□□ 1.53
SSBP4-209ENST00000601357 DNMT3BQ9UBC3 853 aaKnown RBP24.63■■□□□ 1.53
SSBP4-209ENST00000601357 CDH7Q9ULB5 785 aa24.63■■□□□ 1.53
SSBP4-209ENST00000601357 XPOTO43592 962 aaKnown RBP24.62■■□□□ 1.53
SSBP4-209ENST00000601357 GAP43P17677 238 aa24.62■■□□□ 1.53
SSBP4-209ENST00000601357 NUBP1P53384 320 aa24.62■■□□□ 1.53
SSBP4-209ENST00000601357 CTXN3Q4LDR2 81 aa24.62■■□□□ 1.53
SSBP4-209ENST00000601357 SPATA1Q5VX52 437 aa24.62■■□□□ 1.53
SSBP4-209ENST00000601357 SLFN12LQ6IEE8 588 aa24.62■■□□□ 1.53
SSBP4-209ENST00000601357 TCEAL8Q8IYN2 117 aa24.62■■□□□ 1.53
SSBP4-209ENST00000601357 TMEM105Q8N8V8 129 aa24.62■■□□□ 1.53
SSBP4-209ENST00000601357 IKZF4Q9H2S9 585 aa24.62■■□□□ 1.53
SSBP4-209ENST00000601357 POLIQ9UNA4 740 aa24.62■■□□□ 1.53
SSBP4-209ENST00000601357 FRMD3A2A2Y4 597 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 STAT6P42226 847 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 GUCY2FP51841 1108 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 PTPN5P54829 565 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 TPGS2Q68CL5 300 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 JADE1Q6IE81 842 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 ZNF280DQ6N043 979 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 ITFG1Q8TB96 612 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 FGF13Q92913 245 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 OLFML3Q9NRN5 406 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 DERAQ9Y315 318 aa24.61■■□□□ 1.53
SSBP4-209ENST00000601357 PPP6R2O75170 966 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 OAZ2O95190 189 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 SEC24AO95486 1093 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 SRFP11831 508 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 NPR3P17342 541 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 ADSSP30520 456 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 ACOT2P49753 483 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 CLCN5P51795 746 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 POU5F1Q01860 360 aaKnown RBP24.6■■□□□ 1.53
SSBP4-209ENST00000601357 STK38Q15208 465 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 PABPC1LQ4VXU2 614 aaKnown RBP24.6■■□□□ 1.53
SSBP4-209ENST00000601357 CWF19L1Q69YN2 538 aaKnown RBP24.6■■□□□ 1.53
SSBP4-209ENST00000601357 ADALQ6DHV7 355 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 ASTLQ6HA08 431 aaPredicted RBP24.6■■□□□ 1.53
SSBP4-209ENST00000601357 PANK2Q9BZ23 570 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 MRPL44Q9H9J2 332 aaKnown RBP24.6■■□□□ 1.53
SSBP4-209ENST00000601357 AVENQ9NQS1 362 aaPredicted RBP24.6■■□□□ 1.53
SSBP4-209ENST00000601357 WNT16Q9UBV4 365 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 AGO2Q9UKV8 859 aaKnown RBP24.6■■□□□ 1.53
SSBP4-209ENST00000601357 KCNH3Q9ULD8 1083 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 NUMBLQ9Y6R0 609 aa24.6■■□□□ 1.53
SSBP4-209ENST00000601357 TSC2P49815 1807 aa24.59■■□□□ 1.53
SSBP4-209ENST00000601357 PPEF2O14830 753 aa24.59■■□□□ 1.53
SSBP4-209ENST00000601357 SPTLC2O15270 562 aa24.59■■□□□ 1.53
SSBP4-209ENST00000601357 NFICP08651 508 aa24.59■■□□□ 1.53
SSBP4-209ENST00000601357 ARPP19P56211 112 aa24.59■■□□□ 1.53
SSBP4-209ENST00000601357 YWHAHQ04917 246 aaPredicted RBP24.59■■□□□ 1.53
SSBP4-209ENST00000601357 KCNA1Q09470 495 aa24.59■■□□□ 1.53
SSBP4-209ENST00000601357 CRELD2Q6UXH1 353 aaPredicted RBP24.59■■□□□ 1.53
SSBP4-209ENST00000601357 MFSD1Q9H3U5 465 aa24.59■■□□□ 1.53
SSBP4-209ENST00000601357 ASB7Q9H672 318 aa24.59■■□□□ 1.53
SSBP4-209ENST00000601357 TFIP11Q9UBB9 837 aaKnown RBP24.59■■□□□ 1.53
SSBP4-209ENST00000601357 MAFFQ9ULX9 164 aa24.59■■□□□ 1.53
SSBP4-209ENST00000601357 PRRG1O14668 218 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 YEATS4O95619 227 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 ELF1P32519 619 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 CASP5P51878 434 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 LILRA4P59901 499 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 TMEM132DQ14C87 1099 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 L1TD1Q5T7N2 865 aaKnown RBP24.58■■□□□ 1.53
SSBP4-209ENST00000601357 NPAS3Q8IXF0 933 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 SIX5Q8N196 739 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 BEST2Q8NFU1 509 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 FGF14Q92915 247 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 FAM212AQ96EL1 285 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 ZNF396Q96N95 335 aaPredicted RBP24.58■■□□□ 1.53
SSBP4-209ENST00000601357 OXCT2Q9BYC2 517 aaPredicted RBP24.58■■□□□ 1.53
SSBP4-209ENST00000601357 CYP4F11Q9HBI6 524 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 TBC1D7Q9P0N9 293 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 AFF4Q9UHB7 1163 aaKnown RBP24.58■■□□□ 1.53
SSBP4-209ENST00000601357 FBXL21Q9UKT6 434 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 C2CD2Q9Y426 696 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 INSL5Q9Y5Q6 135 aa24.58■■□□□ 1.53
SSBP4-209ENST00000601357 ANO9A1A5B4 782 aa24.57■■□□□ 1.52
SSBP4-209ENST00000601357 PIRO00625 290 aa24.57■■□□□ 1.52
SSBP4-209ENST00000601357 RHOP08100 348 aa24.57■■□□□ 1.52
SSBP4-209ENST00000601357 CFHP08603 1231 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms