RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 DCLRE1AQ6PJP8 1040 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 DAW1Q8N136 415 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ING5Q8WYH8 240 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 WASF1Q92558 559 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NELL1Q92832 810 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NXPE3Q969Y0 559 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 POLR3CQ9BUI4 534 aaPredicted RBP11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 MTRRQ9UBK8 725 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ACKR2O00590 384 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ABLIM1O14639 778 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 LAMTOR5O43504 91 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NR1I2O75469 434 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 RETP07949 1114 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 HNRNPA1P09651 372 aaKnown RBP eCLIP11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 RPA1P27694 616 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 HOXA9P31269 272 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 OR1D2P34982 312 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NAMPTP43490 491 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 FZD5Q13467 585 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PRPF4BQ13523 1007 aaKnown RBP11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 RAB33AQ14088 237 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ZNF174Q15697 407 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PPM1LQ5SGD2 360 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 AXDND1Q5T1B0 1012 aaPredicted RBP11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 HACE1Q8IYU2 909 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 MCPH1Q8NEM0 835 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CCDC43Q96MW1 224 aaKnown RBP11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ZMAT2Q96NC0 199 aaKnown RBP11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 SCNM1Q9BWG6 230 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 BRMS1Q9HCU9 246 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 SPATA6Q9NWH7 488 aaPredicted RBP11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 DPP7Q9UHL4 492 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 RAB23Q9ULC3 237 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CDY1Q9Y6F8 540 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 COL6A6A6NMZ7 2263 aa11.11□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PP2D1A8MPX8 630 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TMEM189-UBE2V1I3L0A0 370 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 OR52Z1P0C646 297 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CEBPBP17676 345 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 FCARP24071 287 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CCR2P41597 374 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CREMQ03060 361 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NCBP1Q09161 790 aaKnown RBP11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 MAPK7Q13164 816 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 MAPK6Q16659 721 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 UPP1Q16831 310 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 LIN9Q5TKA1 542 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 KCNK18Q7Z418 384 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ZBTB8OSQ8IWT0 167 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NACC1Q96RE7 527 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 C2orf40Q9H1Z8 148 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CDT1Q9H211 546 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 POLIQ9UNA4 740 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 F5P12259 2224 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PTPRQQ9UMZ3 2332 aa11.1□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NUP210Q8TEM1 1887 aaPredicted RBP11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 KANSL1LA0AUZ9 987 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 WDR27A2RRH5 827 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ARHGEF35A5YM69 484 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 FOXD2O60548 495 aaPredicted RBP11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 MOSPD3O75425 235 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 SEC24AO95486 1093 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 POU2F2P09086 479 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TARSP26639 723 aaKnown RBP11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TOB1P50616 345 aaPredicted RBP11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NEK4P51957 841 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ROR1Q01973 937 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ANKRD1Q15327 319 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 MLF2Q15773 248 aaPredicted RBP11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 IL17AQ16552 155 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 XKR4Q5GH76 650 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PRSS36Q5K4E3 855 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ELMSAN1Q6PJG2 1045 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ALKAL1Q6UXT8 129 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PROSER1Q86XN7 944 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CCDC83Q8IWF9 413 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ZNF687Q8N1G0 1237 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 DEPTORQ8TB45 409 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TCEAL4Q96EI5 215 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 BHMT2Q9H2M3 363 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PTPRHQ9HD43 1115 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 LTB4R2Q9NPC1 389 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 DENND4CQ5VZ89 1909 aa11.09□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 OBSL1O75147 1896 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 SMIM28A0A1B0GU29 152 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 E9PMD0 336 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 B3GAT3O94766 335 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 VNN2O95498 520 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 NTRK1P04629 796 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 RHOP08100 348 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 OSTNP61366 133 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 ZNF252P-AS1Q0IIN9 211 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 DCAF4L1Q3SXM0 396 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 PABPC1LQ4VXU2 614 aaKnown RBP11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 SEZ6Q53EL9 994 aa11.08□□□□□ -0.64
MIA-RAB4B-201ENST00000600729 SLC44A4Q53GD3 710 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms