RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 PRLRP16471 622 aa21.48■■□□□ 1.03
PNKP-214ENST00000600573 HSPA6P17066 643 aa21.48■■□□□ 1.03
PNKP-214ENST00000600573 GRK4P32298 578 aa21.48■■□□□ 1.03
PNKP-214ENST00000600573 C1QTNF8P60827 252 aa21.48■■□□□ 1.03
PNKP-214ENST00000600573 FAM47CQ5HY64 1035 aa21.48■■□□□ 1.03
PNKP-214ENST00000600573 GPR161Q8N6U8 529 aaKnown RBP21.48■■□□□ 1.03
PNKP-214ENST00000600573 NOCTQ9UK39 431 aaKnown RBP21.48■■□□□ 1.03
PNKP-214ENST00000600573 ANKRD62A6NC57 917 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 CAND2O75155 1236 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 SGPL1O95470 568 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 INHAP05111 366 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 P4HA1P13674 534 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 TCP1P17987 556 aaKnown RBP21.47■■□□□ 1.03
PNKP-214ENST00000600573 ACO1P21399 889 aaKnown RBP21.47■■□□□ 1.03
PNKP-214ENST00000600573 FGFR4P22455 802 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 MYL6P60660 151 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 ZNF699Q32M78 642 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 JADE1Q6IE81 842 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 TMEM192Q8IY95 271 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 RPUSD2Q8IZ73 545 aaKnown RBP21.47■■□□□ 1.03
PNKP-214ENST00000600573 TTC39CQ8N584 583 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 ARRDC4Q8NCT1 418 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 RPGRIP1Q96KN7 1286 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 ISCUQ9H1K1 167 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 NUB1Q9Y5A7 615 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 ANK1P16157 1881 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 RTN2O75298 545 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 ACLYP53396 1101 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 RBP5P82980 135 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 PTK7Q13308 1070 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 ITGA7Q13683 1181 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 CAGE1Q8TC20 777 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 GLT1D1Q96MS3 346 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 BEGAINQ9BUH8 593 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 ARGLU1Q9NWB6 273 aaPredicted RBP21.47■■□□□ 1.03
PNKP-214ENST00000600573 PIN4Q9Y237 131 aaKnown RBP21.47■■□□□ 1.03
PNKP-214ENST00000600573 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.47■■□□□ 1.03
PNKP-214ENST00000600573 CDY2AQ9Y6F7 541 aa21.47■■□□□ 1.03
PNKP-214ENST00000600573 XPOTO43592 962 aaKnown RBP21.46■■□□□ 1.03
PNKP-214ENST00000600573 PALMO75781 387 aa21.46■■□□□ 1.03
PNKP-214ENST00000600573 PTGISQ16647 500 aa21.46■■□□□ 1.03
PNKP-214ENST00000600573 TRIM72Q6ZMU5 477 aa21.46■■□□□ 1.03
PNKP-214ENST00000600573 NOP9Q86U38 636 aaKnown RBP21.46■■□□□ 1.03
PNKP-214ENST00000600573 SLC47A2Q86VL8 602 aa21.46■■□□□ 1.03
PNKP-214ENST00000600573 PPP1R13LQ8WUF5 828 aa21.46■■□□□ 1.03
PNKP-214ENST00000600573 TMEM40Q8WWA1 233 aa21.46■■□□□ 1.03
PNKP-214ENST00000600573 CTNNBL1Q8WYA6 563 aaPredicted RBP21.46■■□□□ 1.03
PNKP-214ENST00000600573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.46■■□□□ 1.032e-7■■■■■ 93.2
PNKP-214ENST00000600573 SEPT11Q9NVA2 429 aaKnown RBP21.46■■□□□ 1.03
PNKP-214ENST00000600573 PCDHB4Q9Y5E5 795 aa21.46■■□□□ 1.03
PNKP-214ENST00000600573 GRID2IPA4D2P6 1211 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 GPR182O15218 404 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 NFICP08651 508 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 H2AFXP16104 143 aaPredicted RBP21.45■■□□□ 1.02
PNKP-214ENST00000600573 TCEAL1Q15170 157 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 ZNF667Q5HYK9 610 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 SPOPLQ6IQ16 392 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 FBXO38Q6PIJ6 1188 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 HACE1Q8IYU2 909 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 C1orf127Q8N9H9 656 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 XYLT2Q9H1B5 865 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 CYP3A43Q9HB55 503 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 SQORQ9Y6N5 450 aa21.45■■□□□ 1.02
PNKP-214ENST00000600573 RPS6KA5O75582 802 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 CLSTN1O94985 981 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 TFRCP02786 760 aaKnown RBP21.44■■□□□ 1.02
PNKP-214ENST00000600573 GALCP54803 685 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 LHX8Q68G74 356 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 ALKAL1Q6UXT8 129 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 UBR7Q8N806 425 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 SLC20A1Q8WUM9 679 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 DDX1Q92499 740 aaKnown RBP21.44■■□□□ 1.02
PNKP-214ENST00000600573 KIF12Q96FN5 646 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 SNX27Q96L92 541 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 OSBPL9Q96SU4 736 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 SENP6Q9GZR1 1112 aaPredicted RBP21.44■■□□□ 1.02
PNKP-214ENST00000600573 DPP3Q9NY33 737 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 SNTG2Q9NY99 539 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 CNTN3Q9P232 1028 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 SRGAP2O75044 1071 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 MYCNP04198 464 aaPredicted RBP21.44■■□□□ 1.02
PNKP-214ENST00000600573 KRT19P08727 400 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 CHRNB2P17787 502 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 NOP2P46087 812 aaKnown RBP21.44■■□□□ 1.02
PNKP-214ENST00000600573 FMO1Q01740 532 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 MGAT3Q09327 533 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 XKR4Q5GH76 650 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 FAM43BQ6ZT52 329 aaPredicted RBP21.44■■□□□ 1.02
PNKP-214ENST00000600573 FAM228AQ86W67 206 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 RHOT2Q8IXI1 618 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 USP38Q8NB14 1042 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 BEST2Q8NFU1 509 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 RFFLQ8WZ73 363 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 CAPZA3Q96KX2 299 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 TLR10Q9BXR5 811 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 EIF2AQ9BY44 585 aaKnown RBP21.44■■□□□ 1.02
PNKP-214ENST00000600573 SIX4Q9UIU6 781 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 NOD1Q9Y239 953 aa21.44■■□□□ 1.02
PNKP-214ENST00000600573 NOC2LQ9Y3T9 749 aaKnown RBP21.44■■□□□ 1.02
PNKP-214ENST00000600573 GRIN2DO15399 1336 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms