RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 MYL6P60660 151 aa23.08■■□□□ 1.28
GRAMD1A-212ENST00000600231 DNAJC21Q5F1R6 531 aaKnown RBP23.08■■□□□ 1.28
GRAMD1A-212ENST00000600231 ARMCX2Q7L311 632 aa23.08■■□□□ 1.28
GRAMD1A-212ENST00000600231 INO80BQ9C086 356 aaPredicted RBP23.08■■□□□ 1.28
GRAMD1A-212ENST00000600231 PCYOX1Q9UHG3 505 aa23.08■■□□□ 1.28
GRAMD1A-212ENST00000600231 MYO1FO00160 1098 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 B4GALT5O43286 388 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 THAP12O43422 761 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 HBP1O60381 514 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 RARAP10276 462 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 GRM1Q13255 1194 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 SIX1Q15475 284 aaPredicted RBP23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 CCDC137Q6PK04 289 aaKnown RBP23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 TMC3Q7Z5M5 1100 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 THNSL1Q8IYQ7 743 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 JPH2Q9BR39 696 aaPredicted RBP23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 ACKR2O00590 384 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 OSTNP61366 133 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 DUOXA2Q1HG44 320 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 CEP85LQ5SZL2 805 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 TRIM72Q6ZMU5 477 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 CEP120Q8N960 986 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 OR2W6PQ8NHA6 318 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 FZD8Q9H461 694 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 MINDY3Q9H8M7 445 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 PTPRHQ9HD43 1115 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 ADAM22Q9P0K1 906 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 SNX24Q9Y343 169 aa23.07■■□□□ 1.28
GRAMD1A-212ENST00000600231 ASB14A6NK59 587 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 H0YGN5 161 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 PROZP22891 400 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 DHX9Q08211 1270 aaKnown RBP23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 DAB2IPQ5VWQ8 1189 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 TSHZ1Q6ZSZ6 1077 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 SHCBP1Q8NEM2 672 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 ZNF606Q8WXB4 792 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 SLC10A4Q96EP9 437 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 FMO2Q99518 471 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 ZDHHC18Q9NUE0 388 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 NFS1Q9Y697 457 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 TFAMQ00059 246 aaKnown RBP23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 CYP1B1Q16678 543 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 ATF7IP2Q5U623 682 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 EEF1DP3Q658K8 133 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 MPZL3Q6UWV2 235 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 UBR7Q8N806 425 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 UBLCP1Q8WVY7 318 aaPredicted RBP23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 MTUS1Q9ULD2 1270 aa23.06■■□□□ 1.28
GRAMD1A-212ENST00000600231 HOXC6P09630 235 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 ZNF132P52740 706 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 IGBP1P78318 339 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 ZNF568Q3ZCX4 644 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 LRRC31Q6UY01 552 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 RASAL2Q9UJF2 1139 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 IQCF3P0C7M6 154 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 CD58P19256 250 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 DRG2P55039 364 aaKnown RBP23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 ARHGAP1Q07960 439 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 TFDP1Q14186 410 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 MMS22LQ6ZRQ5 1243 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 ERAP1Q9NZ08 941 aa23.05■■□□□ 1.28
GRAMD1A-212ENST00000600231 SHOX2O60902 331 aaPredicted RBP23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 COILP38432 576 aaPredicted RBP23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 SLC1A1P43005 524 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 KCNJ1P48048 391 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 PLTPP55058 493 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 MAMLD1Q13495 774 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 TMEM132AQ24JP5 1023 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 ZNF394Q53GI3 561 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 LIN9Q5TKA1 542 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 LRIG3Q6UXM1 1119 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 PHF13Q86YI8 300 aaPredicted RBP23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 EFCAB13Q8IY85 973 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 PCNTO95613 3336 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 LOC102724159A0A0B4J2E5 919 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 RPS6KA5O75582 802 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 POTEJP0CG39 1038 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 PTP4A2Q12974 167 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 PWP2Q15269 919 aaKnown RBP23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 SGSM1Q2NKQ1 1148 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 CCDC105Q8IYK2 499 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 GPRC5AQ8NFJ5 357 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 VCPIP1Q96JH7 1222 aa23.04■■□□□ 1.28
GRAMD1A-212ENST00000600231 C22orf31O95567 290 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 INSRRP14616 1297 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 MBTD1Q05BQ5 628 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 TRPC3Q13507 836 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 SURF1Q15526 300 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 TAPT1Q6NXT6 567 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 FBXO25Q8TCJ0 367 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 PLVAPQ9BX97 442 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 CISHQ9NSE2 258 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 PNMA3Q9UL41 463 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 PODXLO00592 558 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 FSCN2O14926 492 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 CSDE1O75534 798 aaKnown RBP23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 PROSCO94903 275 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 MTMR3Q13615 1198 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 PLEKHA7Q6IQ23 1121 aa23.03■■□□□ 1.28
GRAMD1A-212ENST00000600231 ZDHHC24Q6UX98 284 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms