RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 NTPCRQ9BSD7 190 aaKnown RBP23.14■■□□□ 1.29
PNKP-212ENST00000599454 RUSC1Q9BVN2 902 aa23.14■■□□□ 1.29
PNKP-212ENST00000599454 ZSCAN32Q9NX65 697 aa23.14■■□□□ 1.29
PNKP-212ENST00000599454 PPP4R2Q9NY27 417 aa23.14■■□□□ 1.29
PNKP-212ENST00000599454 AFF4Q9UHB7 1163 aaKnown RBP23.14■■□□□ 1.29
PNKP-212ENST00000599454 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.14■■□□□ 1.29
PNKP-212ENST00000599454 MAN2B1O00754 1011 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 FCARP24071 287 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 MCM4P33991 863 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 ADCY1Q08828 1119 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 STRN3Q13033 797 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 MAPK7Q13164 816 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 CYP4A22Q5TCH4 519 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 IQCEQ6IPM2 695 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 KCTD17Q8N5Z5 321 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 ZBTB44Q8NCP5 570 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 SPIRE2Q8WWL2 714 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 NELL1Q92832 810 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 FAM126AQ9BYI3 521 aaPredicted RBP23.13■■□□□ 1.29
PNKP-212ENST00000599454 HEBP1Q9NRV9 189 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 PCDHB6Q9Y5E3 794 aa23.13■■□□□ 1.29
PNKP-212ENST00000599454 TOM1L1O75674 476 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 SEC24AO95486 1093 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 GUCY2CP25092 1073 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 TOB1P50616 345 aaPredicted RBP23.12■■□□□ 1.29
PNKP-212ENST00000599454 NOLC1Q14978 699 aaKnown RBP eCLIP23.12■■□□□ 1.29
PNKP-212ENST00000599454 FAM78AQ5JUQ0 283 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 POTEHQ6S545 545 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 DTHD1Q6ZMT9 781 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 DCLK2Q8N568 766 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 IRF7Q92985 503 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 SECISBP2LQ93073 1101 aaKnown RBP23.12■■□□□ 1.29
PNKP-212ENST00000599454 C18orf25Q96B23 403 aaPredicted RBP23.12■■□□□ 1.29
PNKP-212ENST00000599454 ASB16Q96NS5 453 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 IER2Q9BTL4 223 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 TRMT61BQ9BVS5 477 aaKnown RBP23.12■■□□□ 1.29
PNKP-212ENST00000599454 BRD9Q9H8M2 597 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 TRPV5Q9NQA5 729 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 PRMT8Q9NR22 394 aaPredicted RBP23.12■■□□□ 1.29
PNKP-212ENST00000599454 DLL3Q9NYJ7 618 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 NCDNQ9UBB6 729 aa23.12■■□□□ 1.29
PNKP-212ENST00000599454 SLC16A4O15374 487 aa23.11■■□□□ 1.29
PNKP-212ENST00000599454 LILRB5O75023 590 aa23.11■■□□□ 1.29
PNKP-212ENST00000599454 HARSP12081 509 aaKnown RBP23.11■■□□□ 1.29
PNKP-212ENST00000599454 SMTNP53814 917 aa23.11■■□□□ 1.29
PNKP-212ENST00000599454 ZPBP2Q6X784 338 aa23.11■■□□□ 1.29
PNKP-212ENST00000599454 DDX12PQ92771 950 aa23.11■■□□□ 1.29
PNKP-212ENST00000599454 TCEAL4Q96EI5 215 aa23.11■■□□□ 1.29
PNKP-212ENST00000599454 ZNF512Q96ME7 567 aaPredicted RBP23.11■■□□□ 1.29
PNKP-212ENST00000599454 TBC1D32Q96NH3 1257 aa23.11■■□□□ 1.29
PNKP-212ENST00000599454 OXCT2Q9BYC2 517 aaPredicted RBP23.11■■□□□ 1.29
PNKP-212ENST00000599454 PCDHB8Q9UN66 801 aa23.11■■□□□ 1.29
PNKP-212ENST00000599454 PP2D1A8MPX8 630 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 MARCKSP29966 332 aaPredicted RBP23.1■■□□□ 1.29
PNKP-212ENST00000599454 EPHA5P54756 1037 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 FZD5Q13467 585 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 SLC10A6Q3KNW5 377 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 MAMSTRQ6ZN01 415 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 DEPDC1BQ8WUY9 529 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 SMARCD2Q92925 531 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 EPC1Q9H2F5 836 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 PLEKHA5Q9HAU0 1116 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 KCND2Q9NZV8 630 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 ANKFY1Q9P2R3 1169 aa23.1■■□□□ 1.29
PNKP-212ENST00000599454 ANK1P16157 1881 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 SHISA7A6NL88 538 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 SEC24BO95487 1268 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 PLS3P13797 630 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 PSMC3P17980 439 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 SDHBP21912 280 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 CCR2P41597 374 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 KCNK18Q7Z418 384 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 ZBTB45Q96K62 511 aaPredicted RBP23.09■■□□□ 1.29
PNKP-212ENST00000599454 MMTAG2Q9BU76 263 aaKnown RBP23.09■■□□□ 1.29
PNKP-212ENST00000599454 GPR88Q9GZN0 384 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 TRPV4Q9HBA0 871 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 ASAH2Q9NR71 780 aa23.09■■□□□ 1.29
PNKP-212ENST00000599454 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.09■■□□□ 1.29
PNKP-212ENST00000599454 NUP210Q8TEM1 1887 aaPredicted RBP23.09■■□□□ 1.29
PNKP-212ENST00000599454 RALGAPA1Q6GYQ0 2036 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 FRYLO94915 3013 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 H0YCG3 227 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 CLDN3O15551 220 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 MEFVO15553 781 aaPredicted RBP23.08■■□□□ 1.29
PNKP-212ENST00000599454 MAPTP10636 758 aaKnown RBP23.08■■□□□ 1.29
PNKP-212ENST00000599454 CPB1P15086 417 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 CDC25AP30304 524 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 MCL1Q07820 350 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 TWF1Q12792 350 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 GRM2Q14416 872 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 PPP2R5DQ14738 602 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 IL17AQ16552 155 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 HYIQ5T013 277 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 ERICH6BQ5W0A0 696 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 MAP4K3Q8IVH8 894 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 TMEM161BQ8NDZ6 487 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 E2F7Q96AV8 911 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 CHRDQ9H2X0 955 aa23.08■■□□□ 1.29
PNKP-212ENST00000599454 ZNF334Q9HCZ1 680 aaPredicted RBP23.08■■□□□ 1.29
PNKP-212ENST00000599454 CEP72Q9P209 647 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms