RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 HS2ST1Q7LGA3 356 aa15.02■□□□□ -0
UPF1-205ENST00000598209 EFCAB13Q8IY85 973 aa15.02■□□□□ -0
UPF1-205ENST00000598209 ENGASEQ8NFI3 743 aa15.02■□□□□ -0
UPF1-205ENST00000598209 SUSD3Q96L08 255 aa15.02■□□□□ -0
UPF1-205ENST00000598209 FBXL18Q96ME1 805 aa15.02■□□□□ -0
UPF1-205ENST00000598209 S1PR5Q9H228 398 aa15.02■□□□□ -0
UPF1-205ENST00000598209 AGPAT3Q9NRZ7 376 aa15.02■□□□□ -0
UPF1-205ENST00000598209 HSPBP1Q9NZL4 362 aa15.02■□□□□ -0
UPF1-205ENST00000598209 USP15Q9Y4E8 981 aaPredicted RBP15.02■□□□□ -0
UPF1-205ENST00000598209 A0A0C4DFX4 3053 aa15.02□□□□□ -0.01
UPF1-205ENST00000598209 SYN3O14994 580 aa15.01□□□□□ -0.01
UPF1-205ENST00000598209 RHOBTB3O94955 611 aa15.01□□□□□ -0.01
UPF1-205ENST00000598209 GLUD1P00367 558 aa15.01□□□□□ -0.01
UPF1-205ENST00000598209 SNRPFP62306 86 aaKnown RBP15.01□□□□□ -0.01
UPF1-205ENST00000598209 PALB2Q86YC2 1186 aa15.01□□□□□ -0.01
UPF1-205ENST00000598209 NT5DC4Q86YG4 428 aa15.01□□□□□ -0.01
UPF1-205ENST00000598209 C12orf76Q8N812 135 aaPredicted RBP15.01□□□□□ -0.01
UPF1-205ENST00000598209 CLSTN3Q9BQT9 956 aa15.01□□□□□ -0.01
UPF1-205ENST00000598209 MAN1C1Q9NR34 630 aa15.01□□□□□ -0.01
UPF1-205ENST00000598209 CGNQ9P2M7 1197 aaKnown RBP15.01□□□□□ -0.01
UPF1-205ENST00000598209 VCANP13611 3396 aa15□□□□□ -0.01
UPF1-205ENST00000598209 NCOR1O75376 2440 aa15□□□□□ -0.01
UPF1-205ENST00000598209 ZNF233A6NK53 670 aa15□□□□□ -0.01
UPF1-205ENST00000598209 SPDYE4A6NLX3 237 aa15□□□□□ -0.01
UPF1-205ENST00000598209 PPEF2O14830 753 aa15□□□□□ -0.01
UPF1-205ENST00000598209 TGM5O43548 720 aa15□□□□□ -0.01
UPF1-205ENST00000598209 GADD45BO75293 160 aaPredicted RBP15□□□□□ -0.01
UPF1-205ENST00000598209 AARSP49588 968 aaKnown RBP eCLIP15□□□□□ -0.014e-6■■■■□ 24
UPF1-205ENST00000598209 CYP2J2P51589 502 aa15□□□□□ -0.01
UPF1-205ENST00000598209 TFAMQ00059 246 aaKnown RBP15□□□□□ -0.01
UPF1-205ENST00000598209 PNOCQ13519 176 aa15□□□□□ -0.01
UPF1-205ENST00000598209 KCNB1Q14721 858 aa15□□□□□ -0.01
UPF1-205ENST00000598209 VARS2Q5ST30 1063 aaKnown RBP15□□□□□ -0.01
UPF1-205ENST00000598209 RARS2Q5T160 578 aaKnown RBP15□□□□□ -0.01
UPF1-205ENST00000598209 C9orf57Q5W0N0 161 aa15□□□□□ -0.01
UPF1-205ENST00000598209 ANKS3Q6ZW76 656 aa15□□□□□ -0.01
UPF1-205ENST00000598209 CBWD2Q8IUF1 395 aa15□□□□□ -0.01
UPF1-205ENST00000598209 SUSD6Q92537 303 aa15□□□□□ -0.01
UPF1-205ENST00000598209 SFXN1Q9H9B4 322 aa15□□□□□ -0.01
UPF1-205ENST00000598209 KIAA1586Q9HCI6 787 aa15□□□□□ -0.01
UPF1-205ENST00000598209 PDE11AQ9HCR9 933 aa15□□□□□ -0.01
UPF1-205ENST00000598209 DPP3Q9NY33 737 aa15□□□□□ -0.01
UPF1-205ENST00000598209 MTRRQ9UBK8 725 aa15□□□□□ -0.01
UPF1-205ENST00000598209 PCDHB8Q9UN66 801 aa15□□□□□ -0.01
UPF1-205ENST00000598209 TSC2P49815 1807 aa15□□□□□ -0.01
UPF1-205ENST00000598209 ANO9A1A5B4 782 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 M0QZQ0 153 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 PIRO00625 290 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 ADAM12O43184 909 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 C1RP00736 705 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 SPATA31D3P0C874 917 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 ITIH3Q06033 890 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 CES5AQ6NT32 575 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 LILRA6Q6PI73 481 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 ELMSAN1Q6PJG2 1045 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 SPATA31D4Q6ZUB0 917 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 C12orf56Q8IXR9 622 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 XXYLT1Q8NBI6 393 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 RDH13Q8NBN7 331 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 GOLGA5Q8TBA6 731 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 CACTINQ8WUQ7 758 aaKnown RBP14.99□□□□□ -0.01
UPF1-205ENST00000598209 TIGD1Q96MW7 591 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 ADAM7Q9H2U9 754 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 KCTD10Q9H3F6 313 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 PRKAG3Q9UGI9 489 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 DPP7Q9UHL4 492 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 CDH22Q9UJ99 828 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 BACE2Q9Y5Z0 518 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 DENND4AQ7Z401 1863 aa14.99□□□□□ -0.01
UPF1-205ENST00000598209 H7C4K7 107 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 KIF20AO95235 890 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 OR1D2P34982 312 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 LILRA4P59901 499 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 ZP2Q05996 745 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 MRPL58Q14197 206 aaKnown RBP14.98□□□□□ -0.01
UPF1-205ENST00000598209 CBX2Q14781 532 aaPredicted RBP14.98□□□□□ -0.01
UPF1-205ENST00000598209 SURF1Q15526 300 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 SNRNP35Q16560 246 aaKnown RBP14.98□□□□□ -0.01
UPF1-205ENST00000598209 RSPO2Q6UXX9 243 aaPredicted RBP14.98□□□□□ -0.01
UPF1-205ENST00000598209 TMC5Q6UXY8 1006 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 DSTYKQ6XUX3 929 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 ADHFE1Q8IWW8 467 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 KREMEN2Q8NCW0 462 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 APPL2Q8NEU8 664 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 HDAC7Q8WUI4 952 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 FAM84AQ96KN4 292 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 PLEKHA4Q9H4M7 779 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 CDY1Q9Y6F8 540 aa14.98□□□□□ -0.01
UPF1-205ENST00000598209 C5orf42Q9H799 3197 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 DOCK6Q96HP0 2047 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 TTC28Q96AY4 2481 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 PDXKO00764 312 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 SPTLC1O15269 473 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 EXOC3O60645 756 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 KINO60870 393 aaKnown RBP14.97□□□□□ -0.01
UPF1-205ENST00000598209 WEE2P0C1S8 567 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 TMEM191BP0C7N4 346 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 PAX3P23760 479 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 MTHFRP42898 656 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 TAF6P49848 677 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms