RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 DSG1Q02413 1049 aa12□□□□□ -0.49
LIG1-211ENST00000596457 ELAVL2Q12926 359 aaKnown RBP12□□□□□ -0.49
LIG1-211ENST00000596457 COL19A1Q14993 1142 aa12□□□□□ -0.49
LIG1-211ENST00000596457 ZBTB6Q15916 424 aa12□□□□□ -0.49
LIG1-211ENST00000596457 SNRNP35Q16560 246 aaKnown RBP12□□□□□ -0.49
LIG1-211ENST00000596457 RTP2Q5QGT7 225 aa12□□□□□ -0.49
LIG1-211ENST00000596457 ZNF658Q5TYW1 1059 aaPredicted RBP12□□□□□ -0.49
LIG1-211ENST00000596457 KIAA0319Q5VV43 1072 aa12□□□□□ -0.49
LIG1-211ENST00000596457 CEP135Q66GS9 1140 aa12□□□□□ -0.49
LIG1-211ENST00000596457 PALB2Q86YC2 1186 aa12□□□□□ -0.49
LIG1-211ENST00000596457 EFCAB13Q8IY85 973 aa12□□□□□ -0.49
LIG1-211ENST00000596457 EFHBQ8N7U6 833 aa12□□□□□ -0.49
LIG1-211ENST00000596457 GOLGA5Q8TBA6 731 aa12□□□□□ -0.49
LIG1-211ENST00000596457 CACTINQ8WUQ7 758 aaKnown RBP12□□□□□ -0.49
LIG1-211ENST00000596457 CCDC127Q96BQ5 260 aa12□□□□□ -0.49
LIG1-211ENST00000596457 GSDMAQ96QA5 445 aa12□□□□□ -0.49
LIG1-211ENST00000596457 TSPAN18Q96SJ8 248 aa12□□□□□ -0.49
LIG1-211ENST00000596457 CDCA3Q99618 268 aaPredicted RBP12□□□□□ -0.49
LIG1-211ENST00000596457 KCTD10Q9H3F6 313 aa12□□□□□ -0.49
LIG1-211ENST00000596457 EPHX3Q9H6B9 360 aa12□□□□□ -0.49
LIG1-211ENST00000596457 KIAA1586Q9HCI6 787 aa12□□□□□ -0.49
LIG1-211ENST00000596457 CGNQ9P2M7 1197 aaKnown RBP12□□□□□ -0.49
LIG1-211ENST00000596457 MAN1B1Q9UKM7 699 aa12□□□□□ -0.49
LIG1-211ENST00000596457 DERAQ9Y315 318 aa12□□□□□ -0.49
LIG1-211ENST00000596457 GOLGA6L22H0YM25 854 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 TMEM189-UBE2V1I3L0A0 370 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 TBX10O75333 385 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 GLP2RO95838 553 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 EFEMP2O95967 443 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 NR3C1P04150 777 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 SPATA31D3P0C874 917 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 SRGAP2BP0DMP2 458 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 DLATP10515 647 aaKnown RBP11.99□□□□□ -0.49
LIG1-211ENST00000596457 EPCAMP16422 314 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 TNNI1P19237 187 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 LRPAP1P30533 357 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 LTBRP36941 435 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 PRCPP42785 496 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 ARPP19P56211 112 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 SURF1Q15526 300 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 PSMD5Q16401 504 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 C9orf57Q5W0N0 161 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.99□□□□□ -0.49
LIG1-211ENST00000596457 SPATA31D4Q6ZUB0 917 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 RNF168Q8IYW5 571 aaPredicted RBP11.99□□□□□ -0.49
LIG1-211ENST00000596457 GUF1Q8N442 669 aaKnown RBP11.99□□□□□ -0.49
LIG1-211ENST00000596457 CSGALNACT2Q8N6G5 542 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 VN1R2Q8NFZ6 395 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 ANKRD36BP1Q96IX9 119 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 FNBP1Q96RU3 617 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 POP1Q99575 1024 aaKnown RBP11.99□□□□□ -0.49
LIG1-211ENST00000596457 CHST7Q9NS84 486 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 LMBRD1Q9NUN5 540 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 AGAP1Q9UPQ3 857 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 R3HCC1Q9Y3T6 440 aaKnown RBP11.99□□□□□ -0.49
LIG1-211ENST00000596457 C2CD2Q9Y426 696 aa11.99□□□□□ -0.49
LIG1-211ENST00000596457 TIMM13Q9Y5L4 95 aaPredicted RBP11.99□□□□□ -0.49
LIG1-211ENST00000596457 TEX28O15482 410 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 LILRB3O75022 631 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 CLSTN1O94985 981 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 TNNC2P02585 160 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 ITGB3P05106 788 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 ADH1AP07327 375 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 CASP4P49662 377 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 POU5F1Q01860 360 aaKnown RBP11.98□□□□□ -0.49
LIG1-211ENST00000596457 CYP24A1Q07973 514 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 CTC1Q2NKJ3 1217 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 CLEC17AQ6ZS10 378 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 NT5DC4Q86YG4 428 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 C12orf56Q8IXR9 622 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 ELOA2Q8IYF1 753 aaPredicted RBP11.98□□□□□ -0.49
LIG1-211ENST00000596457 C12orf76Q8N812 135 aaPredicted RBP11.98□□□□□ -0.49
LIG1-211ENST00000596457 LNX1Q8TBB1 728 aaPredicted RBP11.98□□□□□ -0.49
LIG1-211ENST00000596457 CASP10Q92851 521 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 MTMR12Q9C0I1 747 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 CD207Q9UJ71 328 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 FRMD4BQ9Y2L6 1034 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 HCFC2Q9Y5Z7 792 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 IRAK3Q9Y616 596 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 MYO7AQ13402 2215 aa11.98□□□□□ -0.49
LIG1-211ENST00000596457 GRXCR2A6NFK2 248 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 PIRO00625 290 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 FGFR3P22607 806 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 NR2F2P24468 414 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 POLR2BP30876 1174 aaKnown RBP11.97□□□□□ -0.49
LIG1-211ENST00000596457 OR1D2P34982 312 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 TAF6P49848 677 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 CREMQ03060 361 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 BFSP1Q12934 665 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 ADAM9Q13443 819 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 STIM1Q13586 685 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 RARS2Q5T160 578 aaKnown RBP11.97□□□□□ -0.49
LIG1-211ENST00000596457 SCARA3Q6AZY7 606 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 PTCRAQ6ISU1 281 aaPredicted RBP11.97□□□□□ -0.49
LIG1-211ENST00000596457 KLHL10Q6JEL2 608 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 ANKRD54Q6NXT1 300 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 USP37Q86T82 979 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 PPFIBP1Q86W92 1011 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 OR5B17Q8NGF7 314 aa11.97□□□□□ -0.49
LIG1-211ENST00000596457 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms