RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 TMEM130Q8N3G9 435 aa17.39■□□□□ 0.37
LINC02560-201ENST00000596379 DCLK2Q8N568 766 aa17.39■□□□□ 0.37
LINC02560-201ENST00000596379 SYT2Q8N9I0 419 aaPredicted RBP17.39■□□□□ 0.37
LINC02560-201ENST00000596379 TMEM161BQ8NDZ6 487 aa17.39■□□□□ 0.37
LINC02560-201ENST00000596379 DDX12PQ92771 950 aa17.39■□□□□ 0.37
LINC02560-201ENST00000596379 TBC1D32Q96NH3 1257 aa17.39■□□□□ 0.37
LINC02560-201ENST00000596379 HEBP1Q9NRV9 189 aa17.39■□□□□ 0.37
LINC02560-201ENST00000596379 KCNG1Q9UIX4 513 aa17.39■□□□□ 0.37
LINC02560-201ENST00000596379 FBXO4Q9UKT5 387 aa17.39■□□□□ 0.37
LINC02560-201ENST00000596379 OTOGLQ3ZCN5 2332 aa17.39■□□□□ 0.37
LINC02560-201ENST00000596379 PATJQ8NI35 1801 aa17.39■□□□□ 0.37
LINC02560-201ENST00000596379 NRG2O14511 850 aaPredicted RBP17.38■□□□□ 0.37
LINC02560-201ENST00000596379 KINO60870 393 aaKnown RBP17.38■□□□□ 0.37
LINC02560-201ENST00000596379 MAPTP10636 758 aaKnown RBP17.38■□□□□ 0.37
LINC02560-201ENST00000596379 FCARP24071 287 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 TARSP26639 723 aaKnown RBP17.38■□□□□ 0.37
LINC02560-201ENST00000596379 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
LINC02560-201ENST00000596379 CCR2P41597 374 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 MAGEA9P43362 315 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 CSTF1Q05048 431 aaKnown RBP17.38■□□□□ 0.37
LINC02560-201ENST00000596379 SPAG1Q07617 926 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 ADCY1Q08828 1119 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 FAM78AQ5JUQ0 283 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 HYIQ5T013 277 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 CYP4A22Q5TCH4 519 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 ZNF280DQ6N043 979 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 ZNF852Q6ZMS4 543 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 PDZD4Q76G19 769 aaPredicted RBP17.38■□□□□ 0.37
LINC02560-201ENST00000596379 HS6ST3Q8IZP7 471 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 SUMF1Q8NBK3 374 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 APPL2Q8NEU8 664 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 RUBCNQ92622 972 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 CLDN23Q96B33 292 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 RMDN1Q96DB5 314 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 ZNF512Q96ME7 567 aaPredicted RBP17.38■□□□□ 0.37
LINC02560-201ENST00000596379 ZFP14Q9HCL3 533 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 TUBGCP4Q9UGJ1 667 aa17.38■□□□□ 0.37
LINC02560-201ENST00000596379 SHISA7A6NL88 538 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 NCAM2O15394 837 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 CLDN3O15551 220 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 MICAL2O94851 1124 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 MATR3P43243 847 aaKnown RBP eCLIP17.37■□□□□ 0.37
LINC02560-201ENST00000596379 SLC12A3P55017 1021 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 ATP2C1P98194 919 aaPredicted RBP17.37■□□□□ 0.37
LINC02560-201ENST00000596379 TWF1Q12792 350 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 GRM2Q14416 872 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 RILPL1Q5EBL4 403 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 IQCEQ6IPM2 695 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 ZPBP2Q6X784 338 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 ELMOD1Q8N336 334 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 ZSWIM3Q96MP5 696 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 HAPLN2Q9GZV7 340 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 BRD9Q9H8M2 597 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 CEP72Q9P209 647 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 AFF4Q9UHB7 1163 aaKnown RBP17.37■□□□□ 0.37
LINC02560-201ENST00000596379 PCDHB8Q9UN66 801 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 DCHS1Q96JQ0 3298 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 WDR87Q6ZQQ6 2873 aa17.37■□□□□ 0.37
LINC02560-201ENST00000596379 NPHP3-ACAD11A0A0J9YXS1 232 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 VWA3AA6NCI4 1184 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 PLA2G4BP0C869 781 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 CXCL8P10145 99 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 CPB1P15086 417 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 CACNB1Q02641 598 aaPredicted RBP17.36■□□□□ 0.37
LINC02560-201ENST00000596379 MCL1Q07820 350 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 FZD5Q13467 585 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 RNF19BQ6ZMZ0 732 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 KCTD17Q8N5Z5 321 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 ATRIPQ8WXE1 791 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 DNASE1L2Q92874 299 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 ASB16Q96NS5 453 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 TRMT61BQ9BVS5 477 aaKnown RBP17.36■□□□□ 0.37
LINC02560-201ENST00000596379 PLEKHA5Q9HAU0 1116 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 MAFFQ9ULX9 164 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 MRPS17Q9Y2R5 130 aaKnown RBP17.36■□□□□ 0.37
LINC02560-201ENST00000596379 TIMM13Q9Y5L4 95 aaPredicted RBP17.36■□□□□ 0.37
LINC02560-201ENST00000596379 F5P12259 2224 aa17.36■□□□□ 0.37
LINC02560-201ENST00000596379 M0QZQ0 153 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 MOSPD3O75425 235 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 MYL4P12829 197 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 GJA1P17302 382 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 RPS9P46781 194 aaKnown RBP17.35■□□□□ 0.37
LINC02560-201ENST00000596379 TSSK4Q6SA08 328 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 SMARCD2Q92925 531 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 BICD1Q96G01 975 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 BORCS6Q96GS4 357 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 CDK5RAP3Q96JB5 506 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 KCND2Q9NZV8 630 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 KIF3AQ9Y496 699 aa17.35■□□□□ 0.37
LINC02560-201ENST00000596379 TTC26A0AVF1 554 aa17.34■□□□□ 0.37
LINC02560-201ENST00000596379 SPTLC1O15269 473 aa17.34■□□□□ 0.37
LINC02560-201ENST00000596379 OAZ2O95190 189 aa17.34■□□□□ 0.37
LINC02560-201ENST00000596379 CLTAP09496 248 aa17.34■□□□□ 0.37
LINC02560-201ENST00000596379 PSMC3P17980 439 aa17.34■□□□□ 0.37
LINC02560-201ENST00000596379 LRPAP1P30533 357 aa17.34■□□□□ 0.37
LINC02560-201ENST00000596379 TNFSF9P41273 254 aa17.34■□□□□ 0.37
LINC02560-201ENST00000596379 VIPR2P41587 438 aa17.34■□□□□ 0.37
LINC02560-201ENST00000596379 YWHAHQ04917 246 aaPredicted RBP17.34■□□□□ 0.37
LINC02560-201ENST00000596379 ZBTB6Q15916 424 aa17.34■□□□□ 0.37
LINC02560-201ENST00000596379 ARSHQ5FYA8 562 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms