RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TFAMQ00059 246 aaKnown RBP11.43□□□□□ -0.58
LIG1-210ENST00000596332 STIM1Q13586 685 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 MRPL58Q14197 206 aaKnown RBP11.43□□□□□ -0.58
LIG1-210ENST00000596332 SURF1Q15526 300 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 STX1AQ16623 288 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 ZACNQ401N2 412 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 ANO6Q4KMQ2 910 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 CBWD6Q4V339 395 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 CBWD3Q5JTY5 395 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 CBWD5Q5RIA9 395 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 DPY19L2P1Q6NXN4 242 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 SASS6Q6UVJ0 657 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 RSPO2Q6UXX9 243 aaPredicted RBP11.43□□□□□ -0.58
LIG1-210ENST00000596332 INTS8Q75QN2 995 aaKnown RBP11.43□□□□□ -0.58
LIG1-210ENST00000596332 APTXQ7Z2E3 356 aaKnown RBP11.43□□□□□ -0.58
LIG1-210ENST00000596332 FRMD5Q7Z6J6 570 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 LMO3Q8TAP4 145 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 HASPINQ8TF76 798 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 POF1BQ8WVV4 589 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 SEMA4DQ92854 862 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 DDX27Q96GQ7 796 aaKnown RBP11.43□□□□□ -0.58
LIG1-210ENST00000596332 B3GALT6Q96L58 329 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 UROC1Q96N76 676 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 CDX2Q99626 313 aaPredicted RBP11.43□□□□□ -0.58
LIG1-210ENST00000596332 TSG101Q99816 390 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 ADAM28Q9UKQ2 775 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 LZTS1Q9Y250 596 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 RWDD3Q9Y3V2 267 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 PCDHB12Q9Y5F1 795 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 M0QZQ0 153 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 B3GAT3O94766 335 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 LETM1O95202 739 aaPredicted RBP11.42□□□□□ -0.58
LIG1-210ENST00000596332 ITGB3P05106 788 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 FGFR3P22607 806 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 POLR2BP30876 1174 aaKnown RBP11.42□□□□□ -0.58
LIG1-210ENST00000596332 GCLMP48507 274 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 DUOXA2Q1HG44 320 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 MIIPQ5JXC2 388 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 RTP2Q5QGT7 225 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 SPOUT1Q5T280 376 aaKnown RBP11.42□□□□□ -0.58
LIG1-210ENST00000596332 FUT10Q6P4F1 479 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 DEFB123Q8N688 67 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 BEST2Q8NFU1 509 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 AUTS2Q8WXX7 1259 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 SYAP1Q96A49 352 aaPredicted RBP11.42□□□□□ -0.58
LIG1-210ENST00000596332 SUSD3Q96L08 255 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 FAM193BQ96PV7 902 aaPredicted RBP11.42□□□□□ -0.58
LIG1-210ENST00000596332 BPIFA3Q9BQP9 254 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 COLEC11Q9BWP8 271 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 ZBP1Q9H171 429 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 AAASQ9NRG9 546 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 FANCLQ9NW38 375 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 AGAP1Q9UPQ3 857 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 FRMD4BQ9Y2L6 1034 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 COQ4Q9Y3A0 265 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 NME7Q9Y5B8 376 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 MTCH2Q9Y6C9 303 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 ATG2AQ2TAZ0 1938 aa11.42□□□□□ -0.58
LIG1-210ENST00000596332 COL4A4P53420 1690 aaPredicted RBP11.42□□□□□ -0.58
LIG1-210ENST00000596332 HIDE1A8MVS5 230 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 PMM2O15305 246 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 SOD2P04179 222 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 TNNI1P19237 187 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 PPM1AP35813 382 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 MYL6P60660 151 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 DSG1Q02413 1049 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 UBE3AQ05086 875 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 KCNC3Q14003 757 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 ZNF697Q5TEC3 545 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 VPS52Q8N1B4 723 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 LNX1Q8TBB1 728 aaPredicted RBP11.41□□□□□ -0.58
LIG1-210ENST00000596332 TAS1R2Q8TE23 839 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 MYLIPQ8WY64 445 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 CNOT6LQ96LI5 555 aaKnown RBP11.41□□□□□ -0.58
LIG1-210ENST00000596332 RTP3Q9BQQ7 232 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 C11orf84Q9BUA3 381 aaPredicted RBP11.41□□□□□ -0.58
LIG1-210ENST00000596332 HERC2P3Q9BVR0 1158 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 THAP9Q9H5L6 903 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 VRTNQ9H8Y1 702 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 APOBEC3GQ9HC16 384 aaKnown RBP11.41□□□□□ -0.58
LIG1-210ENST00000596332 GDAP2Q9NXN4 497 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 ARMCX3Q9UH62 379 aaPredicted RBP11.41□□□□□ -0.58
LIG1-210ENST00000596332 ITGA11Q9UKX5 1188 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 NFE2L3Q9Y4A8 694 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 IRAK3Q9Y616 596 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 SCN1AP35498 2009 aa11.41□□□□□ -0.58
LIG1-210ENST00000596332 C2orf71A6NGG8 1288 aa11.4□□□□□ -0.58
LIG1-210ENST00000596332 LRRC10BA6NIK2 292 aa11.4□□□□□ -0.58
LIG1-210ENST00000596332 ADAM12O43184 909 aa11.4□□□□□ -0.58
LIG1-210ENST00000596332 TADA2AO75478 443 aa11.4□□□□□ -0.58
LIG1-210ENST00000596332 STAU1O95793 577 aaKnown RBP11.4□□□□□ -0.58
LIG1-210ENST00000596332 CYP11A1P05108 521 aa11.4□□□□□ -0.58
LIG1-210ENST00000596332 CTSAP10619 480 aa11.4□□□□□ -0.58
LIG1-210ENST00000596332 EPB41P11171 864 aaKnown RBP11.4□□□□□ -0.58
LIG1-210ENST00000596332 TKTP29401 623 aaKnown RBP11.4□□□□□ -0.58
LIG1-210ENST00000596332 GTF2H1P32780 548 aa11.4□□□□□ -0.58
LIG1-210ENST00000596332 ZNF445P59923 1031 aa11.4□□□□□ -0.58
LIG1-210ENST00000596332 RBP5P82980 135 aa11.4□□□□□ -0.58
LIG1-210ENST00000596332 PTPN14Q15678 1187 aa11.4□□□□□ -0.58
LIG1-210ENST00000596332 HSP90AA4PQ58FG1 418 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms