RNA–Protein interactions for RNA: ENST00000593166.1

SLC25A39-217, Transcript of solute carrier family 25 member 39, humanhuman

TSL 3

Gene SLC25A39, Length 797 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-217ENST00000593166 TRAPPC11Q7Z392 1133 aa16.86■□□□□ 0.29
SLC25A39-217ENST00000593166 LRRC52Q8N7C0 313 aa16.86■□□□□ 0.29
SLC25A39-217ENST00000593166 POF1BQ8WVV4 589 aa16.86■□□□□ 0.29
SLC25A39-217ENST00000593166 HERC2P3Q9BVR0 1158 aa16.86■□□□□ 0.29
SLC25A39-217ENST00000593166 NAT10Q9H0A0 1025 aaKnown RBP16.86■□□□□ 0.29
SLC25A39-217ENST00000593166 THAP9Q9H5L6 903 aa16.86■□□□□ 0.29
SLC25A39-217ENST00000593166 SIX4Q9UIU6 781 aa16.86■□□□□ 0.29
SLC25A39-217ENST00000593166 SF3B1O75533 1304 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■■■■ 112.5
SLC25A39-217ENST00000593166 RFXAPO00287 272 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 STX10O60499 249 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 C4BPAP04003 597 aaKnown RBP16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 SOD2P04179 222 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 TRIM49P0CI25 452 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 TRIM49CP0CI26 452 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 IGFBP6P24592 240 aaPredicted RBP16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 POLR2BP30876 1174 aaKnown RBP16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 PNPLA4P41247 253 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 AARSP49588 968 aaKnown RBP eCLIP16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 RBP5P82980 135 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 MYL5Q02045 173 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 CAMK1Q14012 370 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 ZACNQ401N2 412 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 C15orf39Q6ZRI6 1047 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 Q7L0L9 218 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 IRF2BP1Q8IU81 584 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 TRIM59Q8IWR1 403 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 HASPINQ8TF76 798 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 SLC35C1Q96A29 364 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 ZNF560Q96MR9 790 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 BPIFA3Q9BQP9 254 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 GPR62Q9BZJ7 368 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 LMCD1Q9NZU5 365 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 NFE2L3Q9Y4A8 694 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 NUB1Q9Y5A7 615 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 MYO7AQ13402 2215 aa16.85■□□□□ 0.29
SLC25A39-217ENST00000593166 TRAPPC3O43617 180 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 POU3F3P20264 500 aaPredicted RBP16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 DNAJB1P25685 340 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 TAF6P49848 677 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 PPP3CAQ08209 521 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 PTPROQ16827 1216 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 TDRD10Q5VZ19 366 aaKnown RBP16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 PDE12Q6L8Q7 609 aaKnown RBP16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 SV2AQ7L0J3 742 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 FAM114A1Q8IWE2 563 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 GPR65Q8IYL9 337 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 VPS52Q8N1B4 723 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 DEFB123Q8N688 67 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 MRPL38Q96DV4 380 aaKnown RBP16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 SUSD3Q96L08 255 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 CNOT6LQ96LI5 555 aaKnown RBP16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 FAM161BQ96MY7 647 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 ZBP1Q9H171 429 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 TLR9Q9NR96 1032 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 AGAP1Q9UPQ3 857 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 COL4A4P53420 1690 aaPredicted RBP16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 PLXNA4Q9HCM2 1894 aa16.84■□□□□ 0.29
SLC25A39-217ENST00000593166 FSCN2O14926 492 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 STAU1O95793 577 aaKnown RBP16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 CAVIN2O95810 425 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 CTSAP10619 480 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 BRCC3P46736 316 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 GCLMP48507 274 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 LILRA4P59901 499 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 BIRC3Q13489 604 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 ADGRE1Q14246 886 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 SV2CQ496J9 727 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 TIGD5Q53EQ6 642 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 DCAF17Q5H9S7 520 aaPredicted RBP16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 TCERG1LQ5VWI1 586 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 TMEM8AQ9HCN3 771 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 NGRNQ9NPE2 291 aaKnown RBP16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 CHST7Q9NS84 486 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 MTMR10Q9NXD2 777 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 R3HCC1Q9Y3T6 440 aaKnown RBP16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 TRANK1O15050 2925 aa16.83■□□□□ 0.28
SLC25A39-217ENST00000593166 SCN1AP35498 2009 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 M0QZQ0 153 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 SYN3O14994 580 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 SPTLC1O15269 473 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 VNN1O95497 513 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 KRT19P08727 400 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 FGFR3P22607 806 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 GLUD2P49448 558 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 ZNF165P49910 485 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 MXI1P50539 228 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 ERVFC1P60507 584 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 NCOA4Q13772 614 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 NCAPHQ15003 741 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 USP41Q3LFD5 358 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 FAM171A1Q5VUB5 890 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 CDKAL1Q5VV42 579 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 KRT39Q6A163 491 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 SCARA3Q6AZY7 606 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 GUCD1Q96NT3 240 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 GAS2L1Q99501 681 aaPredicted RBP16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 CDX2Q99626 313 aaPredicted RBP16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 TCF25Q9BQ70 676 aa16.82■□□□□ 0.28
SLC25A39-217ENST00000593166 SAMSN1Q9NSI8 373 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms