RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 RPL17P18621 184 aaKnown RBP16.59■□□□□ 0.25
TRIM47-206ENST00000592942 CA8P35219 290 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 CYP2J2P51589 502 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 CLCN4P51793 760 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 MRPL58Q14197 206 aaKnown RBP16.59■□□□□ 0.25
TRIM47-206ENST00000592942 KIAA1841Q6NSI8 718 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 LLGL2Q6P1M3 1020 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 LILRA6Q6PI73 481 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 RSPO2Q6UXX9 243 aaPredicted RBP16.59■□□□□ 0.25
TRIM47-206ENST00000592942 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.59■□□□□ 0.25
TRIM47-206ENST00000592942 EP400NLQ6ZTU2 488 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 CEP57Q86XR8 500 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 SLC9A9Q8IVB4 645 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 XXYLT1Q8NBI6 393 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 BEST2Q8NFU1 509 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 FEZF2Q8TBJ5 459 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 CCDC47Q96A33 483 aaKnown RBP16.59■□□□□ 0.25
TRIM47-206ENST00000592942 CCDC34Q96HJ3 373 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 SUSD3Q96L08 255 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 MFSD14AQ96MC6 490 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 S1PR5Q9H228 398 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 KIAA1586Q9HCI6 787 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 LMBRD1Q9NUN5 540 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 DPP3Q9NY33 737 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.59■□□□□ 0.25
TRIM47-206ENST00000592942 PTPRJQ12913 1337 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 GRXCR2A6NFK2 248 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 M0QZQ0 153 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 XPOTO43592 962 aaKnown RBP16.58■□□□□ 0.24
TRIM47-206ENST00000592942 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
TRIM47-206ENST00000592942 BMP6P22004 513 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 KLRC2P26717 231 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 PRCPP42785 496 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 NDUFV1P49821 464 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 LILRA4P59901 499 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 SNRNP35Q16560 246 aaKnown RBP16.58■□□□□ 0.24
TRIM47-206ENST00000592942 ZCWPW2Q504Y3 356 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 COBLL1Q53SF7 1204 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 ZNF658Q5TYW1 1059 aaPredicted RBP16.58■□□□□ 0.24
TRIM47-206ENST00000592942 ANKRD54Q6NXT1 300 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 PLEKHO2Q8TD55 490 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 SMARCE1Q969G3 411 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 EMILIN2Q9BXX0 1053 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRIM47-206ENST00000592942 MAN1B1Q9UKM7 699 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 SCN1AP35498 2009 aa16.58■□□□□ 0.24
TRIM47-206ENST00000592942 FSD2A1L4K1 749 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 TRAPPC3O43617 180 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 SMC2O95347 1197 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 CASP4P49662 377 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 TFAMQ00059 246 aaKnown RBP16.57■□□□□ 0.24
TRIM47-206ENST00000592942 CYP24A1Q07973 514 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 MYBPC2Q14324 1141 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 CLUL1Q15846 466 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 NFIL3Q16649 462 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 AAK1Q2M2I8 961 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 TJAP1Q5JTD0 557 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 LMBRD2Q68DH5 695 aaPredicted RBP16.57■□□□□ 0.24
TRIM47-206ENST00000592942 C1orf127Q8N9H9 656 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 SMRP1Q8NCR6 262 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 OR5B17Q8NGF7 314 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 GOLGA5Q8TBA6 731 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 NOC3LQ8WTT2 800 aaKnown RBP16.57■□□□□ 0.24
TRIM47-206ENST00000592942 ZNF516Q92618 1163 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 POP1Q99575 1024 aaKnown RBP16.57■□□□□ 0.24
TRIM47-206ENST00000592942 INTS13Q9NVM9 706 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 SIX4Q9UIU6 781 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 NUB1Q9Y5A7 615 aa16.57■□□□□ 0.24
TRIM47-206ENST00000592942 TCF20Q9UGU0 1960 aaKnown RBP16.57■□□□□ 0.24
TRIM47-206ENST00000592942 C5orf42Q9H799 3197 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 SYN3O14994 580 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 MBTPS2O43462 519 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 TGM5O43548 720 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 C1RP00736 705 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 NR3C1P04150 777 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 COL9A1P20849 921 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 PSMD6Q15008 389 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 PSMD5Q16401 504 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 VARS2Q5ST30 1063 aaKnown RBP16.56■□□□□ 0.24
TRIM47-206ENST00000592942 ISM2Q6H9L7 571 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 PPFIBP1Q86W92 1011 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 PALB2Q86YC2 1186 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 CASP10Q92851 521 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 RMND1Q9NWS8 449 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 MTRRQ9UBK8 725 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 CD207Q9UJ71 328 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 HOOK1Q9UJC3 728 aaKnown RBP16.56■□□□□ 0.24
TRIM47-206ENST00000592942 PCDHB8Q9UN66 801 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 BACE2Q9Y5Z0 518 aa16.56■□□□□ 0.24
TRIM47-206ENST00000592942 TNFRSF10AO00220 468 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 EXOC3O60645 756 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 KIF20AO95235 890 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 ADH1AP07327 375 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 SPATA31D3P0C874 917 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 IL9P15248 144 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 CD44P16070 742 aaKnown RBP16.55■□□□□ 0.24
TRIM47-206ENST00000592942 MCM4P33991 863 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 MCCD1P59942 119 aaPredicted RBP16.55■□□□□ 0.24
TRIM47-206ENST00000592942 CLDN10P78369 228 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 SURF1Q15526 300 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms