RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 GSDMAQ96QA5 445 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 POP1Q99575 1024 aaKnown RBP12.85□□□□□ -0.35
H3F3B-212ENST00000592643 S1PR5Q9H228 398 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 THEGQ9P2T0 379 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 TRAF3IP3Q9Y228 551 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 ANK1P16157 1881 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 PDCD11Q14690 1871 aaKnown RBP12.85□□□□□ -0.35
H3F3B-212ENST00000592643 VWA8A3KMH1 1905 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 M0QZQ0 153 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 PDXKO00764 312 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 IL18RAPO95256 599 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 LDHAP00338 332 aaKnown RBP12.84□□□□□ -0.35
H3F3B-212ENST00000592643 CLCN4P51793 760 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 LILRA4P59901 499 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 CYP24A1Q07973 514 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 MORC3Q14149 939 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 LEXMQ3ZCV2 418 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 COBLL1Q53SF7 1204 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 ZNF658Q5TYW1 1059 aaPredicted RBP12.84□□□□□ -0.35
H3F3B-212ENST00000592643 ISM2Q6H9L7 571 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 LLGL2Q6P1M3 1020 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 LILRA6Q6PI73 481 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 ADSSL1Q8N142 457 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 XXYLT1Q8NBI6 393 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 GPT2Q8TD30 523 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 SUSD3Q96L08 255 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 ASB2Q96Q27 587 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 TSPAN18Q96SJ8 248 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 CDCA3Q99618 268 aaPredicted RBP12.84□□□□□ -0.35
H3F3B-212ENST00000592643 TTPALQ9BTX7 342 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 MRPL17Q9NRX2 175 aaKnown RBP12.84□□□□□ -0.35
H3F3B-212ENST00000592643 DPP3Q9NY33 737 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 COG5Q9UP83 839 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 CITO14578 2027 aa12.84□□□□□ -0.35
H3F3B-212ENST00000592643 ZNF233A6NK53 670 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 KIAA0391O15091 583 aaKnown RBP12.83□□□□□ -0.36
H3F3B-212ENST00000592643 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
H3F3B-212ENST00000592643 AKAP3O75969 853 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 NR3C1P04150 777 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 URODP06132 367 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 MCCD1P59942 119 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-212ENST00000592643 DLG4P78352 724 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 PSMD6Q15008 389 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 CLUL1Q15846 466 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 CAMK4Q16566 473 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 NFIL3Q16649 462 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-212ENST00000592643 HS2ST1Q7LGA3 356 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 ATXN2LQ8WWM7 1075 aaKnown RBP12.83□□□□□ -0.36
H3F3B-212ENST00000592643 SMARCE1Q969G3 411 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 EEF2KMTQ96G04 330 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 MED15Q96RN5 788 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 MTMR12Q9C0I1 747 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 FNIP2Q9P278 1114 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 CGNQ9P2M7 1197 aaKnown RBP12.83□□□□□ -0.36
H3F3B-212ENST00000592643 STK39Q9UEW8 545 aa12.83□□□□□ -0.36
H3F3B-212ENST00000592643 PPP1R3GB7ZBB8 358 aa12.82□□□□□ -0.36
H3F3B-212ENST00000592643 NCK2O43639 380 aa12.82□□□□□ -0.36
H3F3B-212ENST00000592643 CLDN10P78369 228 aa12.82□□□□□ -0.36
H3F3B-212ENST00000592643 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
H3F3B-212ENST00000592643 VARS2Q5ST30 1063 aaKnown RBP12.82□□□□□ -0.36
H3F3B-212ENST00000592643 CENPPQ6IPU0 288 aa12.82□□□□□ -0.36
H3F3B-212ENST00000592643 ANKRD54Q6NXT1 300 aa12.82□□□□□ -0.36
H3F3B-212ENST00000592643 CEP57Q86XR8 500 aa12.82□□□□□ -0.36
H3F3B-212ENST00000592643 ZC3H3Q8IXZ2 948 aaKnown RBP12.82□□□□□ -0.36
H3F3B-212ENST00000592643 C12orf76Q8N812 135 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-212ENST00000592643 SMRP1Q8NCR6 262 aa12.82□□□□□ -0.36
H3F3B-212ENST00000592643 BEST2Q8NFU1 509 aa12.82□□□□□ -0.36
H3F3B-212ENST00000592643 NOC3LQ8WTT2 800 aaKnown RBP12.82□□□□□ -0.36
H3F3B-212ENST00000592643 RTP3Q9BQQ7 232 aa12.82□□□□□ -0.36
H3F3B-212ENST00000592643 MTRRQ9UBK8 725 aa12.82□□□□□ -0.36
H3F3B-212ENST00000592643 TIMM13Q9Y5L4 95 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-212ENST00000592643 TRIM49BA6NDI0 452 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 LRRIQ3A6PVS8 624 aaPredicted RBP12.81□□□□□ -0.36
H3F3B-212ENST00000592643 BIN1O00499 593 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 TGM5O43548 720 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 EXOC3O60645 756 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 SMC2O95347 1197 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 PAPLNO95428 1278 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 VNN2O95498 520 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 CST3P01034 146 aaPredicted RBP12.81□□□□□ -0.36
H3F3B-212ENST00000592643 ITGB3P05106 788 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 SPATA31D3P0C874 917 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 IL9P15248 144 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 POLR2BP30876 1174 aaKnown RBP12.81□□□□□ -0.36
H3F3B-212ENST00000592643 CA8P35219 290 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 NDUFV1P49821 464 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 MRPS5P82675 430 aaKnown RBP12.81□□□□□ -0.36
H3F3B-212ENST00000592643 ELAVL2Q12926 359 aaKnown RBP12.81□□□□□ -0.36
H3F3B-212ENST00000592643 MYBPC2Q14324 1141 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 PSMD5Q16401 504 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 KIAA1841Q6NSI8 718 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 EP400NLQ6ZTU2 488 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 SPATA31D4Q6ZUB0 917 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 LIMS2Q7Z4I7 341 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 PALB2Q86YC2 1186 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms