RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 TTC26A0AVF1 554 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 GOLGA6L4A6NEF3 574 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 I3L4J1 428 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 ADSSP30520 456 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 BRCC3P46736 316 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 SIGLEC14Q08ET2 396 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 ELAVL2Q12926 359 aaKnown RBP15.13■□□□□ 0.01
CLIP3-205ENST00000592017 POSTNQ15063 836 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 PSMD5Q16401 504 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 ARMCX5Q6P1M9 558 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 RSPO2Q6UXX9 243 aaPredicted RBP15.13■□□□□ 0.01
CLIP3-205ENST00000592017 NELFCDQ8IXH7 590 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 PBXIP1Q96AQ6 731 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 ASIC4Q96FT7 647 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 DDX27Q96GQ7 796 aaKnown RBP15.13■□□□□ 0.01
CLIP3-205ENST00000592017 MFSD14AQ96MC6 490 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 FAM213AQ9BRX8 229 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 RHOBTB2Q9BYZ6 727 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 PLEKHA4Q9H4M7 779 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 SLC39A2Q9NP94 309 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 EXOC1Q9NV70 894 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 DPP7Q9UHL4 492 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 USP25Q9UHP3 1055 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 NUB1Q9Y5A7 615 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 STYXL1Q9Y6J8 313 aa15.13■□□□□ 0.01
CLIP3-205ENST00000592017 PVALEFA0A1B0GWK0 134 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 N4BP1O75113 896 aaKnown RBP15.12■□□□□ 0.01
CLIP3-205ENST00000592017 NFICP08651 508 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 PRR29P0C7W0 189 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 PLA2G5P39877 138 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 GUCY2FP51841 1108 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 CREMQ03060 361 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 JADE1Q6IE81 842 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 CYP26C1Q6V0L0 522 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.12■□□□□ 0.01
CLIP3-205ENST00000592017 CCDC149Q6ZUS6 474 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 OTOP3Q7RTS5 596 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 SMG7Q92540 1137 aaKnown RBP15.12■□□□□ 0.01
CLIP3-205ENST00000592017 CBWD1Q9BRT8 395 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 PCIF1Q9H4Z3 704 aa15.12■□□□□ 0.01
CLIP3-205ENST00000592017 WDR6Q9NNW5 1121 aaKnown RBP15.12■□□□□ 0.01
CLIP3-205ENST00000592017 UBQLN1Q9UMX0 589 aaKnown RBP15.12■□□□□ 0.01
CLIP3-205ENST00000592017 ZDBF2Q9HCK1 2354 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 FAM237AA0A1B0GTK4 181 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 GOLGA8IPA6NC78 632 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 GOLGA8JA6NMD2 632 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 EIF3DO15371 548 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLIP3-205ENST00000592017 XPOTO43592 962 aaKnown RBP15.11■□□□□ 0.01
CLIP3-205ENST00000592017 TRAPPC3O43617 180 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 ZMYND10O75800 440 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 TKTP29401 623 aaKnown RBP15.11■□□□□ 0.01
CLIP3-205ENST00000592017 RPL9P32969 192 aaKnown RBP15.11■□□□□ 0.01
CLIP3-205ENST00000592017 MCM4P33991 863 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 ELMSAN1Q6PJG2 1045 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 PLCD3Q8N3E9 789 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 ZSWIM2Q8NEG5 633 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 FAM122AQ96E09 287 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 PRKD2Q9BZL6 878 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 ZDHHC7Q9NXF8 308 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 MTRRQ9UBK8 725 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 FBXW11Q9UKB1 542 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 CIZ1Q9ULV3 898 aaPredicted RBP15.11■□□□□ 0.01
CLIP3-205ENST00000592017 SORCS3Q9UPU3 1222 aa15.11■□□□□ 0.01
CLIP3-205ENST00000592017 ZNF202O95125 648 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 GARTP22102 1010 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 OR1D2P34982 312 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 EHHADHQ08426 723 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 RAB33AQ14088 237 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 TMEM132DQ14C87 1099 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 KMT5BQ4FZB7 885 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 KRBA2Q6ZNG9 492 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 EPM2AIP1Q7L775 607 aaPredicted RBP15.1■□□□□ 0.01
CLIP3-205ENST00000592017 CD302Q8IX05 232 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 UBALD2Q8IYN6 164 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 BEST2Q8NFU1 509 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 SCFD1Q8WVM8 642 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 ACSF2Q96CM8 615 aaPredicted RBP15.1■□□□□ 0.01
CLIP3-205ENST00000592017 MYADMQ96S97 322 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 RBAKQ9NYW8 714 aaPredicted RBP15.1■□□□□ 0.01
CLIP3-205ENST00000592017 BACE2Q9Y5Z0 518 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 UBE4BO95155 1302 aa15.1■□□□□ 0.01
CLIP3-205ENST00000592017 WDFY4Q6ZS81 3184 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 KLRC4O43908 158 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 LDHAP00338 332 aaKnown RBP15.09■□□□□ 0.01
CLIP3-205ENST00000592017 PDGFBP01127 241 aaPredicted RBP15.09■□□□□ 0.01
CLIP3-205ENST00000592017 HOXD13P35453 343 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 MTMR3Q13615 1198 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 IER5LQ5T953 404 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 PDXDC1Q6P996 788 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 CRELD2Q6UXH1 353 aaPredicted RBP15.09■□□□□ 0.01
CLIP3-205ENST00000592017 FBXL6Q8N531 539 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 ZNF507Q8TCN5 953 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 ASB7Q9H672 318 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 PIDD1Q9HB75 910 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 CLUHO75153 1309 aa15.09■□□□□ 0.01
CLIP3-205ENST00000592017 EXTL3O43909 919 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 IL18RAPO95256 599 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 RPN1P04843 607 aaKnown RBP15.08■□□□□ 0
CLIP3-205ENST00000592017 MYL1P05976 194 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 ADRB2P07550 413 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms