RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SNRNP35Q16560 246 aaKnown RBP7.94□□□□□ -1.14
SMAD4-210ENST00000590061 VWA3BQ502W6 1294 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 ZC2HC1CQ53FD0 456 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-210ENST00000590061 SPECC1LQ69YQ0 1117 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 GDF6Q6KF10 455 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-210ENST00000590061 LRRC55Q6ZSA7 311 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 NLRP8Q86W28 1048 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 PPFIBP1Q86W92 1011 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 GAS2L3Q86XJ1 694 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 CREBRFQ8IUR6 639 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 TTC39CQ8N584 583 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 TRAPPC12Q8WVT3 735 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 GLMNQ92990 594 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 HPS3Q969F9 1004 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 LENG1Q96BZ8 264 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-210ENST00000590061 PGBD4Q96DM1 585 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 CNOT6LQ96LI5 555 aaKnown RBP7.94□□□□□ -1.14
SMAD4-210ENST00000590061 NAP1L5Q96NT1 182 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-210ENST00000590061 DUSP9Q99956 384 aaKnown RBP7.94□□□□□ -1.14
SMAD4-210ENST00000590061 SH2D3AQ9BRG2 576 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 FDXACB1Q9BRP7 624 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-210ENST00000590061 NDST4Q9H3R1 872 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 ASB7Q9H672 318 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 C11orf49Q9H6J7 331 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 IFT122Q9HBG6 1241 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 C1orf112Q9NSG2 853 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 DERAQ9Y315 318 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 TELO2Q9Y4R8 837 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 ITIH6Q6UXX5 1313 aa7.94□□□□□ -1.14
SMAD4-210ENST00000590061 ARHGEF37A1IGU5 675 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 MYADML2A6NDP7 307 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 OIP5O43482 229 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 ZC3H11AO75152 810 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 VTNP04004 478 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 PTMAP06454 111 aaKnown RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 P4HA1P13674 534 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 SELPP16109 830 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 PROZP22891 400 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 CYP2J2P51589 502 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 VAMP7P51809 220 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 COPB1P53618 953 aaKnown RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 SOX10P56693 466 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 CAP1Q01518 475 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 UBXN1Q04323 297 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 BFSP1Q12934 665 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 PAK2Q13177 524 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 SNX17Q15036 470 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 KRT31Q15323 416 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 DUOXA2Q1HG44 320 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 KIZQ2M2Z5 673 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 ZNF568Q3ZCX4 644 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 HS1BP3Q53T59 392 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 FIGNQ5HY92 759 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 SLC39A5Q6ZMH5 540 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 GBP6Q6ZN66 633 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 C1orf229Q6ZS94 237 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 ENOSF1Q7L5Y1 443 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 TRIM59Q8IWR1 403 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 RPUSD2Q8IZ73 545 aaKnown RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 BSNDQ8WZ55 320 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 SEPT8Q92599 483 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 TAF4BQ92750 862 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 JAKMIP2Q96AA8 810 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 TRIM44Q96DX7 344 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 MFSD14AQ96MC6 490 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 ACAP3Q96P50 834 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 OXCT2Q9BYC2 517 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 IMPG2Q9BZV3 1241 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 ZCCHC2Q9C0B9 1178 aaKnown RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 SENP6Q9GZR1 1112 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 RPF1Q9H9Y2 349 aaKnown RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 SAMSN1Q9NSI8 373 aaKnown RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 AGPAT5Q9NUQ2 364 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 SLC38A7Q9NVC3 462 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 ZNHIT6Q9NWK9 470 aaKnown RBP7.93□□□□□ -1.14
SMAD4-210ENST00000590061 PRKAG2Q9UGJ0 569 aa7.93□□□□□ -1.14
SMAD4-210ENST00000590061 TRIP12Q14669 1992 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-210ENST00000590061 ADCY5O95622 1261 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 EOMESO95936 686 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 TNNC2P02585 160 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 ATF7P17544 494 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-210ENST00000590061 FGFR3P22607 806 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 HOXD13P35453 343 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 ZNF75DP51815 510 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 CYP24A1Q07973 514 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 NR1I3Q14994 352 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 PSMD6Q15008 389 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 TEAD4Q15561 434 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 TCERG1LQ5VWI1 586 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 KRT39Q6A163 491 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 WDR49Q8IV35 697 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 CNGA4Q8IV77 575 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 FAM126BQ8IXS8 530 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 SIX5Q8N196 739 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 TXLNBQ8N3L3 684 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 CCDC112Q8NEF3 446 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 TPCN2Q8NHX9 752 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 ERGIC2Q96RQ1 377 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 HTATIP2Q9BUP3 242 aa7.92□□□□□ -1.14
SMAD4-210ENST00000590061 TARS2Q9BW92 718 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms