RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ASB7	Q9H672	318 aa		18.8	■□□□□ 0.6
MBD1-221	ENST00000589867	TMEM206	Q9H813	350 aa		18.8	■□□□□ 0.6
MBD1-221	ENST00000589867	DZANK1	Q9NVP4	752 aa		18.8	■□□□□ 0.6
MBD1-221	ENST00000589867	MTRR	Q9UBK8	725 aa		18.8	■□□□□ 0.6
MBD1-221	ENST00000589867	PRKAG3	Q9UGI9	489 aa		18.8	■□□□□ 0.6
MBD1-221	ENST00000589867	SPTLC1	O15269	473 aa		18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	ZNF202	O95125	648 aa		18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	DPYD	Q12882	1025 aa		18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	SNW1	Q13573	536 aa	Known RBP	18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	FMR1NB	Q8N0W7	255 aa	Predicted RBP	18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	GJD3	Q8N144	294 aa		18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	CXorf38	Q8TB03	319 aa		18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	MAN1C1	Q9NR34	630 aa		18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	FAM50B	Q9Y247	325 aa		18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	DERA	Q9Y315	318 aa		18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	C2CD2	Q9Y426	696 aa		18.79	■□□□□ 0.6
MBD1-221	ENST00000589867	PIR	O00625	290 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	EXTL3	O43909	919 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	RFPL2	O75678	378 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	GLUD1	P00367	558 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	C1R	P00736	705 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	SRGAP2B	P0DMP2	458 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	CBX2	Q14781	532 aa	Predicted RBP	18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	TMEM132D	Q14C87	1099 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	VARS2	Q5ST30	1063 aa	Known RBP	18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	C9orf57	Q5W0N0	161 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	TMC5	Q6UXY8	1006 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	NELFCD	Q8IXH7	590 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	TMEM87A	Q8NBN3	555 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	ZNF707	Q96C28	371 aa	Predicted RBP	18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	POMK	Q9H5K3	350 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	AGPAT3	Q9NRZ7	376 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	BACE2	Q9Y5Z0	518 aa		18.78	■□□□□ 0.6
MBD1-221	ENST00000589867	UBE4B	O95155	1302 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	TSC2	P49815	1807 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	MYO10	Q9HD67	2058 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	LOC730098	B7Z3J9	87 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867		M0QZQ0	153 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	SYN3	O14994	580 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	ITIH3	Q06033	890 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	RAB33A	Q14088	237 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	ARMCX5	Q6P1M9	558 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	GPR149	Q86SP6	731 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	CBWD2	Q8IUF1	395 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	CMAS	Q8NFW8	434 aa	Predicted RBP	18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	BORCS6	Q96GS4	357 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	PHF7	Q9BWX1	381 aa	Predicted RBP	18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	GZF1	Q9H116	711 aa	Predicted RBP	18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	HSPBP1	Q9NZL4	362 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	FBXW11	Q9UKB1	542 aa		18.77	■□□□□ 0.6
MBD1-221	ENST00000589867	DOCK8	Q8NF50	2099 aa		18.77	■□□□□ 0.59
MBD1-221	ENST00000589867	PTPRJ	Q12913	1337 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	NOTCH4	Q99466	2003 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	TRAPPC3	O43617	180 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	RPN1	P04843	607 aa	Known RBP	18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	MYL1	P05976	194 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	OR1D2	P34982	312 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	LILRA4	P59901	499 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	STXBP4	Q6ZWJ1	553 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	GPD1L	Q8N335	351 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	KREMEN2	Q8NCW0	462 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	BEST2	Q8NFU1	509 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	HDAC7	Q8WUI4	952 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	KCTD10	Q9H3F6	313 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	SFXN1	Q9H9B4	322 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	PDE11A	Q9HCR9	933 aa		18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	RBAK	Q9NYW8	714 aa	Predicted RBP	18.76	■□□□□ 0.59
MBD1-221	ENST00000589867	CLIC2	O15247	247 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	IL18RAP	O95256	599 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	LDHA	P00338	332 aa	Known RBP	18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	MCM4	P33991	863 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	CREM	Q03060	361 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	KNOP1	Q1ED39	458 aa	Known RBP	18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	SLC8B1	Q6J4K2	584 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	ANKS3	Q6ZW76	656 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	C12orf56	Q8IXR9	622 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	DPP3	Q9NY33	737 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	PCDHB8	Q9UN66	801 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	NUB1	Q9Y5A7	615 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	TIMM13	Q9Y5L4	95 aa	Predicted RBP	18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	CDY1	Q9Y6F8	540 aa		18.75	■□□□□ 0.59
MBD1-221	ENST00000589867	XPOT	O43592	962 aa	Known RBP	18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	GADD45B	O75293	160 aa	Predicted RBP	18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	RHOBTB3	O94955	611 aa		18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	PDXDC1	Q6P996	788 aa		18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	C1orf127	Q8N9H9	656 aa		18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	RHOBTB2	Q9BYZ6	727 aa		18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	PLEKHA4	Q9H4M7	779 aa		18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	EPHX3	Q9H6B9	360 aa		18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	EXOC1	Q9NV70	894 aa		18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	SIX4	Q9UIU6	781 aa		18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	FBXL5	Q9UKA1	691 aa		18.74	■□□□□ 0.59
MBD1-221	ENST00000589867	CCDC195	A0A1B0GUA6	201 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	WDR27	A2RRH5	827 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	KIAA0391	O15091	583 aa	Known RBP	18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	ZMYND10	O75800	440 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	ABLIM3	O94929	683 aa		18.73	■□□□□ 0.59
MBD1-221	ENST00000589867	VNN2	O95498	520 aa		18.73	■□□□□ 0.59

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