RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SLFN12LQ6IEE8 588 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 STXBP4Q6ZWJ1 553 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 SYCP3Q8IZU3 236 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 AUTS2Q8WXX7 1259 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 SNX27Q96L92 541 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 PPP1R10Q96QC0 940 aaKnown RBP11.3□□□□□ -0.6
SDF2-208ENST00000589788 ACCSQ96QU6 501 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 VN1R3Q9BXE9 311 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 EMILIN2Q9BXX0 1053 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 TRIM9Q9C026 710 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 CXCL16Q9H2A7 254 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 OLFML3Q9NRN5 406 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 CACNG4Q9UBN1 327 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 SSX2IPQ9Y2D8 614 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 A0A0B4J269 797 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 A0A1B0GVL5 298 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 F8W810 466 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 DLL1O00548 723 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 C2CD2LO14523 706 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 TBX10O75333 385 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 SF3B1O75533 1304 aaKnown RBP eCLIP11.29□□□□□ -0.6
SDF2-208ENST00000589788 CLTAP09496 248 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 CXCL8P10145 99 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 MYBP10242 640 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 BMP1P13497 986 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 PFKFB1P16118 471 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 AFMP43652 599 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 DLX2Q07687 328 aaPredicted RBP11.29□□□□□ -0.6
SDF2-208ENST00000589788 PTPN14Q15678 1187 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 MAP7D1Q3KQU3 841 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 L1TD1Q5T7N2 865 aaKnown RBP11.29□□□□□ -0.6
SDF2-208ENST00000589788 LLGL2Q6P1M3 1020 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 FUT10Q6P4F1 479 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 ALKAL1Q6UXT8 129 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.29□□□□□ -0.6
SDF2-208ENST00000589788 HASPINQ8TF76 798 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 STK32AQ8WU08 396 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 UROC1Q96N76 676 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 C7orf25Q9BPX7 421 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 PAAF1Q9BRP4 392 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 HERC2P3Q9BVR0 1158 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 COL25A1Q9BXS0 654 aaPredicted RBP11.29□□□□□ -0.6
SDF2-208ENST00000589788 HAPLN2Q9GZV7 340 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 PLEKHA5Q9HAU0 1116 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 CNTN3Q9P232 1028 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 USP25Q9UHP3 1055 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 CD207Q9UJ71 328 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 BARX2Q9UMQ3 279 aaPredicted RBP11.29□□□□□ -0.6
SDF2-208ENST00000589788 IRAK3Q9Y616 596 aa11.29□□□□□ -0.6
SDF2-208ENST00000589788 GOLGA6L4A6NEF3 574 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 ANKRD63C9JTQ0 380 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 CLASP2O75122 1294 aaKnown RBP11.28□□□□□ -0.6
SDF2-208ENST00000589788 KIF4AO95239 1232 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 GLP2RO95838 553 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 SLFN14P0C7P3 912 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 KCNE1P15382 129 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 GGCXP38435 758 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 SYKP43405 635 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 CASP5P51878 434 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 RBM10P98175 930 aaKnown RBP11.28□□□□□ -0.6
SDF2-208ENST00000589788 PPP2R3AQ06190 1150 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 ELAVL2Q12926 359 aaKnown RBP11.28□□□□□ -0.6
SDF2-208ENST00000589788 POSTNQ15063 836 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 NAB2Q15742 525 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 SLC10A6Q3KNW5 377 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 USP41Q3LFD5 358 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 XKR4Q5GH76 650 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 CNNM4Q6P4Q7 775 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 TAS1R1Q7RTX1 841 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 PPFIBP1Q86W92 1011 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 POMGNT1Q8WZA1 660 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 CASP10Q92851 521 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 GBP4Q96PP9 640 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 STRA6Q9BX79 667 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 GPR62Q9BZJ7 368 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 TMEM206Q9H813 350 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 RPF1Q9H9Y2 349 aaKnown RBP11.28□□□□□ -0.6
SDF2-208ENST00000589788 CLEC1BQ9P126 229 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 SERTAD1Q9UHV2 236 aa11.28□□□□□ -0.6
SDF2-208ENST00000589788 AGO2Q9UKV8 859 aaKnown RBP11.28□□□□□ -0.6
SDF2-208ENST00000589788 PDCD11Q14690 1871 aaKnown RBP11.27□□□□□ -0.6
SDF2-208ENST00000589788 A0A1W2PQ27 194 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 A0A1W2PQ64 194 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 TISP43B9A030 160 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 XPOTO43592 962 aaKnown RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 TRAPPC3O43617 180 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 B3GAT3O94766 335 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 ADH1AP07327 375 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 CNPP09543 421 aaKnown RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 KLRC2P26717 231 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 RPL9P32969 192 aaKnown RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 TNFSF9P41273 254 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 CLCNKBP51801 687 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 DSG1Q02413 1049 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 SOX4Q06945 474 aaPredicted RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 KCNA1Q09470 495 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 SMAD4Q13485 552 aaKnown RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 UPP1Q16831 310 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms