RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 C9orf57Q5W0N0 161 aa24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 FUT10Q6P4F1 479 aa24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 CREBRFQ8IUR6 639 aa24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 C1orf127Q8N9H9 656 aa24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 MAFAQ8NHW3 353 aaPredicted RBP24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 TMC2Q8TDI7 906 aa24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 ZNF560Q96MR9 790 aa24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 GAS2L1Q99501 681 aaPredicted RBP24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 ENTPD7Q9NQZ7 604 aa24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 ARMCX3Q9UH62 379 aaPredicted RBP24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 PUF60Q9UHX1 559 aaKnown RBP24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 ITGA11Q9UKX5 1188 aa24.24■■□□□ 1.47
R3HDM4-205ENST00000589445 PHACTR2O75167 634 aa24.23■■□□□ 1.47
R3HDM4-205ENST00000589445 PLCB3Q01970 1234 aa24.23■■□□□ 1.47
R3HDM4-205ENST00000589445 HSP90AA4PQ58FG1 418 aa24.23■■□□□ 1.47
R3HDM4-205ENST00000589445 DCLRE1AQ6PJP8 1040 aa24.23■■□□□ 1.47
R3HDM4-205ENST00000589445 CNOT6LQ96LI5 555 aaKnown RBP24.23■■□□□ 1.47
R3HDM4-205ENST00000589445 MED15Q96RN5 788 aa24.23■■□□□ 1.47
R3HDM4-205ENST00000589445 VN1R3Q9BXE9 311 aa24.23■■□□□ 1.47
R3HDM4-205ENST00000589445 TLR9Q9NR96 1032 aa24.23■■□□□ 1.47
R3HDM4-205ENST00000589445 TMEM189-UBE2V1I3L0A0 370 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 IGFBP4P22692 258 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 IGFBP6P24592 240 aaPredicted RBP24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 DNAJB1P25685 340 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 BRCC3P46736 316 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 UBE3AQ05086 875 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 PTPROQ16827 1216 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 PLPP4Q5VZY2 271 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 FILIP1Q7Z7B0 1213 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 VPS52Q8N1B4 723 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 SPPL3Q8TCT6 385 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 MYLIPQ8WY64 445 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 CDX2Q99626 313 aaPredicted RBP24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 TCF25Q9BQ70 676 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 HERC2P3Q9BVR0 1158 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 NAT10Q9H0A0 1025 aaKnown RBP24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 AGAP1Q9UPQ3 857 aa24.22■■□□□ 1.47
R3HDM4-205ENST00000589445 EYSQ5T1H1 3165 aa24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 GNA14O95837 355 aa24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 CT47A1Q5JQC4 288 aaPredicted RBP24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 TRAPPC11Q7Z392 1133 aa24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 DDX53Q86TM3 631 aaKnown RBP24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 MICALL1Q8N3F8 863 aa24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 AOPEPQ8N6M6 819 aa24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 B3GALT6Q96L58 329 aa24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 GPR62Q9BZJ7 368 aa24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 METTL14Q9HCE5 456 aaKnown RBP24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 LZTS1Q9Y250 596 aa24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 NFE2L3Q9Y4A8 694 aa24.21■■□□□ 1.47
R3HDM4-205ENST00000589445 LPXNO60711 386 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 URODP06132 367 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 COL9A1P20849 921 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 PIK3CAP42336 1068 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 GCLMP48507 274 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 TAF6P49848 677 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 AP3M2P53677 418 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 MYL5Q02045 173 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 ELAVL2Q12926 359 aaKnown RBP24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 SV2CQ496J9 727 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 FAM171A1Q5VUB5 890 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 TDRD10Q5VZ19 366 aaKnown RBP24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 KIAA1841Q6NSI8 718 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 TMC7Q7Z402 723 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 FRMD5Q7Z6J6 570 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 CEP57Q86XR8 500 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 FAM114A1Q8IWE2 563 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 MICAL1Q8TDZ2 1067 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 AUTS2Q8WXX7 1259 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 ZNF516Q92618 1163 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 BORCS6Q96GS4 357 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 LMAN2LQ9H0V9 348 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 MAGEC2Q9UBF1 373 aaPredicted RBP24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 SIX4Q9UIU6 781 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 PCDHGC5Q9Y5F6 944 aa24.2■■□□□ 1.46
R3HDM4-205ENST00000589445 ANO9A1A5B4 782 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 C2CD2LO14523 706 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 TRAPPC3O43617 180 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 STX10O60499 249 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 SOD2P04179 222 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 FOSL2P15408 326 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 GLUD2P49448 558 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 MXI1P50539 228 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 RBP5P82980 135 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 TRPC3Q13507 836 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 C1orf220Q5T0J3 134 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 DSTYKQ6XUX3 929 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 FUCA2Q9BTY2 467 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 ZBP1Q9H171 429 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 THAP9Q9H5L6 903 aa24.19■■□□□ 1.46
R3HDM4-205ENST00000589445 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.18■■□□□ 1.46
R3HDM4-205ENST00000589445 PIRO00625 290 aa24.18■■□□□ 1.46
R3HDM4-205ENST00000589445 IRS1P35568 1242 aa24.18■■□□□ 1.46
R3HDM4-205ENST00000589445 PNPLA4P41247 253 aa24.18■■□□□ 1.46
R3HDM4-205ENST00000589445 MTIF2P46199 727 aaKnown RBP24.18■■□□□ 1.46
R3HDM4-205ENST00000589445 CLDN10P78369 228 aa24.18■■□□□ 1.46
R3HDM4-205ENST00000589445 PPP3CAQ08209 521 aa24.18■■□□□ 1.46
R3HDM4-205ENST00000589445 ADGRE1Q14246 886 aa24.18■■□□□ 1.46
R3HDM4-205ENST00000589445 LRRC52Q8N7C0 313 aa24.18■■□□□ 1.46
R3HDM4-205ENST00000589445 MRPL38Q96DV4 380 aaKnown RBP24.18■■□□□ 1.46
R3HDM4-205ENST00000589445 STK39Q9UEW8 545 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms