RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 IQUBQ8NA54 791 aa15.7■□□□□ 0.1
DDX39A-208ENST00000588692 BEST2Q8NFU1 509 aa15.7■□□□□ 0.1
DDX39A-208ENST00000588692 MAGEF1Q9HAY2 307 aa15.7■□□□□ 0.1
DDX39A-208ENST00000588692 PANK4Q9NVE7 773 aa15.7■□□□□ 0.1
DDX39A-208ENST00000588692 KBTBD4Q9NVX7 518 aa15.7■□□□□ 0.1
DDX39A-208ENST00000588692 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.7■□□□□ 0.1
DDX39A-208ENST00000588692 LIMD1Q9UGP4 676 aa15.7■□□□□ 0.1
DDX39A-208ENST00000588692 PCDHB8Q9UN66 801 aa15.7■□□□□ 0.1
DDX39A-208ENST00000588692 DOCK8Q8NF50 2099 aa15.7■□□□□ 0.1
DDX39A-208ENST00000588692 ZNF318Q5VUA4 2279 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 M0QZQ0 153 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 TBC1D4O60343 1298 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 GCNT3O95395 438 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 GBP2P32456 591 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-208ENST00000588692 AARSP49588 968 aaKnown RBP eCLIP15.69■□□□□ 0.1
DDX39A-208ENST00000588692 AMPD3Q01432 767 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 ROR1Q01973 937 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 MRPL58Q14197 206 aaKnown RBP15.69■□□□□ 0.1
DDX39A-208ENST00000588692 AXDND1Q5T1B0 1012 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-208ENST00000588692 SPATA1Q5VX52 437 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 SHC4Q6S5L8 630 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 STXBP4Q6ZWJ1 553 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 ZNF461Q8TAF7 563 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 SLC7A14Q8TBB6 771 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 POMGNT1Q8WZA1 660 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 PBXIP1Q96AQ6 731 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 ASIC4Q96FT7 647 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 KCNH6Q9H252 994 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 TBC1D7Q9P0N9 293 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 IGSF9Q9P2J2 1179 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 EPS15L1Q9UBC2 864 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 C2CD2Q9Y426 696 aa15.69■□□□□ 0.1
DDX39A-208ENST00000588692 ZFP37Q9Y6Q3 630 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-208ENST00000588692 TISP43B9A030 160 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 ASGR2P07307 311 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 ME1P48163 572 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 ACOT2P49753 483 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 PKP1Q13835 747 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 TMEM132DQ14C87 1099 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 JADE1Q6IE81 842 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 SUGP1Q8IWZ8 645 aaKnown RBP15.68■□□□□ 0.1
DDX39A-208ENST00000588692 SPRYD3Q8NCJ5 442 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 FAM212AQ96EL1 285 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 OXCT2Q9BYC2 517 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-208ENST00000588692 TRIM9Q9C026 710 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 TMEM206Q9H813 350 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 FBXL5Q9UKA1 691 aa15.68■□□□□ 0.1
DDX39A-208ENST00000588692 N4BP1O75113 896 aaKnown RBP15.67■□□□□ 0.1
DDX39A-208ENST00000588692 ABLIM3O94929 683 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 IL18RAPO95256 599 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 ADSSP30520 456 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 CASP5P51878 434 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 TDGQ13569 410 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 FOXD4L6Q3SYB3 417 aaPredicted RBP15.67■□□□□ 0.1
DDX39A-208ENST00000588692 CTXN3Q4LDR2 81 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 TPGS2Q68CL5 300 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 CNNM4Q6P4Q7 775 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 FOXD4L3Q6VB84 417 aaPredicted RBP15.67■□□□□ 0.1
DDX39A-208ENST00000588692 NT5DC4Q86YG4 428 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 SYCP3Q8IZU3 236 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 NXPE3Q969Y0 559 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 DHX58Q96C10 678 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 PYM1Q9BRP8 204 aaKnown RBP15.67■□□□□ 0.1
DDX39A-208ENST00000588692 KCNK12Q9HB15 430 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 FAM13BQ9NYF5 915 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 MAFFQ9ULX9 164 aa15.67■□□□□ 0.1
DDX39A-208ENST00000588692 KMT2EQ8IZD2 1858 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 ARHGEF37A1IGU5 675 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 WDR27A2RRH5 827 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 CCL16O15467 120 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 OAZ2O95190 189 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 LDHAP00338 332 aaKnown RBP15.66■□□□□ 0.1
DDX39A-208ENST00000588692 NFICP08651 508 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 ATF2P15336 505 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 GARTP22102 1010 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 FSHRP23945 695 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 ELF1P32519 619 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 YWHAHQ04917 246 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-208ENST00000588692 KCNA1Q09470 495 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 GET4Q7L5D6 327 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-208ENST00000588692 GRASPQ7Z6J2 395 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-208ENST00000588692 TCEAL8Q8IYN2 117 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 FBXL6Q8N531 539 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 MYADMQ96S97 322 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 PCDHA7Q9UN72 937 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 POLIQ9UNA4 740 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 TSC2P49815 1807 aa15.66■□□□□ 0.1
DDX39A-208ENST00000588692 PRRG1O14668 218 aa15.65■□□□□ 0.1
DDX39A-208ENST00000588692 LAMP2P13473 410 aa15.65■□□□□ 0.1
DDX39A-208ENST00000588692 PLA2G5P39877 138 aa15.65■□□□□ 0.1
DDX39A-208ENST00000588692 GUCY2FP51841 1108 aa15.65■□□□□ 0.1
DDX39A-208ENST00000588692 LILRA4P59901 499 aa15.65■□□□□ 0.1
DDX39A-208ENST00000588692 ASIC1P78348 528 aa15.65■□□□□ 0.1
DDX39A-208ENST00000588692 DNM1Q05193 864 aaKnown RBP15.65■□□□□ 0.1
DDX39A-208ENST00000588692 RESP18Q5W5W9 173 aa15.65■□□□□ 0.1
DDX39A-208ENST00000588692 CRELD2Q6UXH1 353 aaPredicted RBP15.65■□□□□ 0.1
DDX39A-208ENST00000588692 DSTYKQ6XUX3 929 aa15.65■□□□□ 0.1
DDX39A-208ENST00000588692 USP37Q86T82 979 aa15.65■□□□□ 0.1
DDX39A-208ENST00000588692 IKZF4Q9H2S9 585 aa15.65■□□□□ 0.1
DDX39A-208ENST00000588692 RCOR1Q9UKL0 485 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms