RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 FAM177A1Q8N128 213 aaPredicted RBP4.47□□□□□ -1.69
VPS4B-203ENST00000588323 VTA1Q9NP79 307 aa4.47□□□□□ -1.69
VPS4B-203ENST00000588323 DNM3Q9UQ16 869 aa4.47□□□□□ -1.69
VPS4B-203ENST00000588323 PCDHGA2Q9Y5H1 932 aa4.47□□□□□ -1.69
VPS4B-203ENST00000588323 ENTPD2Q9Y5L3 495 aa4.47□□□□□ -1.69
VPS4B-203ENST00000588323 MPPED1O15442 326 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 AMY1AP04745 511 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 SRGNP10124 158 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 FCER1AP12319 257 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 OSMP13725 252 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 DDCP20711 480 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 SOX5P35711 763 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 ZNF81P51508 661 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 PROK1P58294 105 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 SLFN5Q08AF3 891 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 PTF1AQ7RTS3 328 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 PEG10Q86TG7 708 aaKnown RBP4.46□□□□□ -1.7
VPS4B-203ENST00000588323 ZGPATQ8N5A5 531 aaKnown RBP4.46□□□□□ -1.7
VPS4B-203ENST00000588323 NLGN4YQ8NFZ3 816 aaPredicted RBP4.46□□□□□ -1.7
VPS4B-203ENST00000588323 SCARB1Q8WTV0 552 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 TMEM125Q96AQ2 219 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 FBXL20Q96IG2 436 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 TIMP4Q99727 224 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 C14orf119Q9NWQ9 140 aa4.46□□□□□ -1.7
VPS4B-203ENST00000588323 A0A1W2PS29 197 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 HAUS5O94927 633 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 MAPK10P53779 464 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 TMPRSS15P98073 1019 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 NBPF8Q3BBV2 869 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 TSTD2Q5T7W7 516 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 KIAA1614Q5VZ46 1190 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 KIAA0895LQ68EN5 471 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 BHLHA9Q7RTU4 235 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 CLNKQ7Z7G1 428 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 Q8NA96 180 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 TFAP2BQ92481 460 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 SARAFQ96BY9 339 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 AHCYL2Q96HN2 611 aaKnown RBP4.45□□□□□ -1.7
VPS4B-203ENST00000588323 CAAP1Q9H8G2 361 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 CCM2LQ9NUG4 571 aaPredicted RBP4.45□□□□□ -1.7
VPS4B-203ENST00000588323 INTS13Q9NVM9 706 aa4.45□□□□□ -1.7
VPS4B-203ENST00000588323 MYBBP1AQ9BQG0 1328 aaKnown RBP4.45□□□□□ -1.7
VPS4B-203ENST00000588323 PRAMEF33A0A0G2JMD5 474 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 CGB1A6NKQ9 187 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 PRAMEF10O60809 474 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 WT1P19544 449 aaPredicted RBP4.44□□□□□ -1.7
VPS4B-203ENST00000588323 GRIA3P42263 894 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 GPR3P46089 330 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 MTNR1BP49286 362 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 RPS7P62081 194 aaKnown RBP4.44□□□□□ -1.7
VPS4B-203ENST00000588323 ATP8B2P98198 1209 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 EXOSC10Q01780 885 aaKnown RBP4.44□□□□□ -1.7
VPS4B-203ENST00000588323 FPGSQ05932 587 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 STAT4Q14765 748 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 CT47A1Q5JQC4 288 aaPredicted RBP4.44□□□□□ -1.7
VPS4B-203ENST00000588323 DACT2Q5SW24 774 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 TOR1AIP2Q8NFQ8 470 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 OR2I1PQ8NGU4 316 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 C7orf25Q9BPX7 421 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 C1QTNF7Q9BXJ2 289 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 C11orf54Q9H0W9 315 aaPredicted RBP4.44□□□□□ -1.7
VPS4B-203ENST00000588323 CDYLQ9Y232 598 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 NEU2Q9Y3R4 380 aa4.44□□□□□ -1.7
VPS4B-203ENST00000588323 MANSC4A6NHS7 340 aaPredicted RBP4.43□□□□□ -1.7
VPS4B-203ENST00000588323 PROM1O43490 865 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 KCNA2P16389 499 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 CDK11BP21127 795 aaKnown RBP4.43□□□□□ -1.7
VPS4B-203ENST00000588323 SOX10P56693 466 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 CTXN1P60606 82 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 ZNF844Q08AG5 666 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 PREPLQ4J6C6 727 aaPredicted RBP4.43□□□□□ -1.7
VPS4B-203ENST00000588323 C1QL2Q7Z5L3 287 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 RHOT1Q8IXI2 618 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 SLC30A5Q8TAD4 765 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 HASPINQ8TF76 798 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 CHAC2Q8WUX2 184 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 PGBD1Q96JS3 809 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 ZNF778Q96MU6 729 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 TLR10Q9BXR5 811 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 SLKQ9H2G2 1235 aaPredicted RBP4.43□□□□□ -1.7
VPS4B-203ENST00000588323 WNT6Q9Y6F9 365 aa4.43□□□□□ -1.7
VPS4B-203ENST00000588323 WIPF3A6NGB9 483 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 PROB1E7EW31 1015 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 AGFG2O95081 481 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 CPEP16870 476 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 GATA3P23771 443 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 EZH2Q15910 746 aaKnown RBP4.42□□□□□ -1.7
VPS4B-203ENST00000588323 SRSF7Q16629 238 aaKnown RBP eCLIP4.42□□□□□ -1.7
VPS4B-203ENST00000588323 CD300EQ496F6 205 aaPredicted RBP4.42□□□□□ -1.7
VPS4B-203ENST00000588323 TSHZ1Q6ZSZ6 1077 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 AMIGO2Q86SJ2 522 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.42□□□□□ -1.7
VPS4B-203ENST00000588323 DDB2Q92466 427 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 LPIN2Q92539 896 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 DPF2Q92785 391 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 ZNF70Q9UC06 446 aaPredicted RBP4.42□□□□□ -1.7
VPS4B-203ENST00000588323 GPR45Q9Y5Y3 372 aa4.42□□□□□ -1.7
VPS4B-203ENST00000588323 WDR91A4D1P6 747 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 PRKD3O94806 890 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 PRKCGP05129 697 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms