RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CCDC188H7C350 402 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 CPP00450 1065 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 ECHS1P30084 290 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 TMEM62Q0P6H9 643 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 MKRN4PQ13434 485 aaPredicted RBP15.7■□□□□ 0.1
CCDC43-203ENST00000588210 EMC2Q15006 297 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 TCERG1LQ5VWI1 586 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 C16orf59Q7L2K0 433 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 KLHL7Q8IXQ5 586 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 RASGEF1CQ8N431 466 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 TCP11Q8WWU5 503 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 VWCEQ96DN2 955 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCDC43-203ENST00000588210 SUCLA2Q9P2R7 463 aaPredicted RBP15.7■□□□□ 0.1
CCDC43-203ENST00000588210 NOC2LQ9Y3T9 749 aaKnown RBP15.7■□□□□ 0.1
CCDC43-203ENST00000588210 ARID2Q68CP9 1835 aa15.7■□□□□ 0.1
CCDC43-203ENST00000588210 ARHGEF35A5YM69 484 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 TGFB1I1O43294 461 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 CEP104O60308 925 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 FGBP02675 491 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 VTNP04004 478 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 ACRP10323 421 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 RNASE9P60153 205 aaKnown RBP15.69■□□□□ 0.1
CCDC43-203ENST00000588210 RINT1Q6NUQ1 792 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 LRIG3Q6UXM1 1119 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 SYCE1Q8N0S2 351 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 SH2D3CQ8N5H7 860 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 MKNK1Q9BUB5 465 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 ATP6V0A4Q9HBG4 840 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 NCANO14594 1321 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 ATXN2Q99700 1313 aaKnown RBP15.69■□□□□ 0.1
CCDC43-203ENST00000588210 SCN5AQ14524 2016 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 HMGB1P1B2RPK0 211 aaPredicted RBP15.69■□□□□ 0.1
CCDC43-203ENST00000588210 DDX3XO00571 662 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC43-203ENST00000588210 STAT1P42224 750 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 PDCLQ13371 301 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 DRP2Q13474 957 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 TRADDQ15628 312 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 TMEM240Q5SV17 173 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 PADI6Q6TGC4 694 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 ZNF365Q70YC5 407 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 OLIG1Q8TAK6 271 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 ATP6V1G3Q96LB4 118 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 GOLPH3Q9H4A6 298 aa15.69■□□□□ 0.1
CCDC43-203ENST00000588210 COLQQ9Y215 455 aaPredicted RBP15.69■□□□□ 0.1
CCDC43-203ENST00000588210 A0A087WUV0 522 aaPredicted RBP15.68■□□□□ 0.1
CCDC43-203ENST00000588210 A0A1W2PPC1 479 aa15.68■□□□□ 0.1
CCDC43-203ENST00000588210 GPR32O75388 356 aa15.68■□□□□ 0.1
CCDC43-203ENST00000588210 FAM13AO94988 1023 aa15.68■□□□□ 0.1
CCDC43-203ENST00000588210 CRYBB1P53674 252 aaPredicted RBP15.68■□□□□ 0.1
CCDC43-203ENST00000588210 NLRP11P59045 1033 aaKnown RBP15.68■□□□□ 0.1
CCDC43-203ENST00000588210 FBXO47Q5MNV8 452 aa15.68■□□□□ 0.1
CCDC43-203ENST00000588210 KCTD16Q68DU8 428 aa15.68■□□□□ 0.1
CCDC43-203ENST00000588210 PEX26Q7Z412 305 aa15.68■□□□□ 0.1
CCDC43-203ENST00000588210 FAM186BQ8IYM0 893 aa15.68■□□□□ 0.1
CCDC43-203ENST00000588210 TDHQ8IZJ6 230 aa15.68■□□□□ 0.1
CCDC43-203ENST00000588210 MCPH1Q8NEM0 835 aa15.68■□□□□ 0.1
CCDC43-203ENST00000588210 XPNPEP1Q9NQW7 623 aa15.68■□□□□ 0.1
CCDC43-203ENST00000588210 CLIC2O15247 247 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 ASAP2O43150 1006 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 NR1D1P20393 614 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 PSMC2P35998 433 aaKnown RBP15.67■□□□□ 0.1
CCDC43-203ENST00000588210 GPC3P51654 580 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 KCNA1Q09470 495 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 KIZQ2M2Z5 673 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 PLEKHG4Q58EX7 1191 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 CNKSR3Q6P9H4 555 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 TSHZ1Q6ZSZ6 1077 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 TADA2BQ86TJ2 420 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 SLC30A5Q8TAD4 765 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 LNX1Q8TBB1 728 aaPredicted RBP15.67■□□□□ 0.1
CCDC43-203ENST00000588210 PSPC1Q8WXF1 523 aaKnown RBP15.67■□□□□ 0.1
CCDC43-203ENST00000588210 TMEM143Q96AN5 459 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 RNPC3Q96LT9 517 aaKnown RBP15.67■□□□□ 0.1
CCDC43-203ENST00000588210 SLITRK6Q9H5Y7 841 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 GINS2Q9Y248 185 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 PLAAQ9Y263 795 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 DAAM1Q9Y4D1 1078 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 PCDHB13Q9Y5F0 798 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 GHRP10912 638 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 SOX5P35711 763 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 HLTFQ14527 1009 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC43-203ENST00000588210 LPIN1Q14693 890 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 SHHQ15465 462 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 TTC31Q49AM3 519 aaPredicted RBP15.67■□□□□ 0.1
CCDC43-203ENST00000588210 GJB7Q6PEY0 223 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 C1orf186Q6ZWK4 172 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 NT5DC3Q86UY8 548 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 ZNF410Q86VK4 478 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 RHPN2Q8IUC4 686 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 PRPF31Q8WWY3 499 aaKnown RBP15.67■□□□□ 0.1
CCDC43-203ENST00000588210 HERVK_113Q902F9 699 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 SEPT8Q92599 483 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 APBB2Q92870 758 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 LRRC45Q96CN5 670 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 HES6Q96HZ4 224 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 ADAMTS10Q9H324 1103 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 SEL1LQ9UBV2 794 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 FAM169AQ9Y6X4 670 aa15.67■□□□□ 0.1
CCDC43-203ENST00000588210 SRRM3A6NNA2 597 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms