RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 CNGA4Q8IV77 575 aa16.08■□□□□ 0.16
NFIX-208ENST00000587260 C1orf127Q8N9H9 656 aa16.08■□□□□ 0.16
NFIX-208ENST00000587260 TC2NQ8N9U0 490 aa16.08■□□□□ 0.16
NFIX-208ENST00000587260 BEST2Q8NFU1 509 aa16.08■□□□□ 0.16
NFIX-208ENST00000587260 TAS1R2Q8TE23 839 aa16.08■□□□□ 0.16
NFIX-208ENST00000587260 CACTINQ8WUQ7 758 aaKnown RBP16.08■□□□□ 0.16
NFIX-208ENST00000587260 RNPC3Q96LT9 517 aaKnown RBP16.08■□□□□ 0.16
NFIX-208ENST00000587260 CASD1Q96PB1 797 aa16.08■□□□□ 0.16
NFIX-208ENST00000587260 INTS2Q9H0H0 1204 aaKnown RBP16.08■□□□□ 0.16
NFIX-208ENST00000587260 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.08■□□□□ 0.166e-8■■■■■ 184
NFIX-208ENST00000587260 TBC1D13Q9NVG8 400 aa16.08■□□□□ 0.16
NFIX-208ENST00000587260 CEP72Q9P209 647 aa16.08■□□□□ 0.16
NFIX-208ENST00000587260 UBQLN1Q9UMX0 589 aaKnown RBP16.08■□□□□ 0.16
NFIX-208ENST00000587260 LUC7L2Q9Y383 392 aaKnown RBP16.08■□□□□ 0.16
NFIX-208ENST00000587260 CASTOR2A6NHX0 329 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 INPPL1O15357 1258 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 B4GALT3O60512 393 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 MFAP3LO75121 409 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 UCHL3P15374 230 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 RFX1P22670 979 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 PIK3CAP42336 1068 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 ZBED6P86452 979 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 RNASELQ05823 741 aaKnown RBP16.07■□□□□ 0.16
NFIX-208ENST00000587260 SHHQ15465 462 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 NAB2Q15742 525 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 ZBTB6Q15916 424 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 TRAPPC11Q7Z392 1133 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 RABGGTAQ92696 567 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 SEMA4DQ92854 862 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 ELMO3Q96BJ8 720 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 SLC9A7Q96T83 725 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 YME1L1Q96TA2 773 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 NAA15Q9BXJ9 866 aaKnown RBP16.07■□□□□ 0.16
NFIX-208ENST00000587260 DPP3Q9NY33 737 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 APEX2Q9UBZ4 518 aa16.07■□□□□ 0.16
NFIX-208ENST00000587260 XPOTO43592 962 aaKnown RBP16.06■□□□□ 0.16
NFIX-208ENST00000587260 VNN1O95497 513 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 ATP2A2P16615 1042 aaKnown RBP16.06■□□□□ 0.16
NFIX-208ENST00000587260 POLR2BP30876 1174 aaKnown RBP16.06■□□□□ 0.16
NFIX-208ENST00000587260 ZNF280BQ86YH2 543 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 LRRC8AQ8IWT6 810 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 LRRC43Q8N309 656 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 CPLX3Q8WVH0 158 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 BAP1Q92560 729 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 PANX2Q96RD6 677 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 DNAJC7Q99615 494 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 GDF15Q99988 308 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 MRPL9Q9BYD2 267 aaKnown RBP16.06■□□□□ 0.16
NFIX-208ENST00000587260 SLC38A7Q9NVC3 462 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 MYO6Q9UM54 1294 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 SCN1AP35498 2009 aa16.06■□□□□ 0.16
NFIX-208ENST00000587260 PPEF2O14830 753 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 LRRN2O75325 713 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 DDHD2O94830 711 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 GJB5O95377 273 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 HLA-DRAP01903 254 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 HNRNPH3P31942 346 aaKnown RBP16.05■□□□□ 0.16
NFIX-208ENST00000587260 KRT9P35527 623 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 TUSC3Q13454 348 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 RASIP1Q5U651 963 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 SMYD5Q6GMV2 418 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 HERC6Q8IVU3 1022 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 ZNF397Q8NF99 534 aaPredicted RBP16.05■□□□□ 0.16
NFIX-208ENST00000587260 OR8K1Q8NGG5 319 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 CXorf38Q8TB03 319 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 FAM193BQ96PV7 902 aaPredicted RBP16.05■□□□□ 0.16
NFIX-208ENST00000587260 PAAF1Q9BRP4 392 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 ZBED2Q9BTP6 218 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 NUCKS1Q9H1E3 243 aaKnown RBP16.05■□□□□ 0.16
NFIX-208ENST00000587260 RC3H2Q9HBD1 1191 aaKnown RBP16.05■□□□□ 0.16
NFIX-208ENST00000587260 DNAJB4Q9UDY4 337 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 SIX4Q9UIU6 781 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 ITGA11Q9UKX5 1188 aa16.05■□□□□ 0.16
NFIX-208ENST00000587260 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.05■□□□□ 0.16
NFIX-208ENST00000587260 FECHP22830 423 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 CLCNKBP51801 687 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 ADKP55263 362 aaKnown RBP16.04■□□□□ 0.16
NFIX-208ENST00000587260 POLR2FP61218 127 aaKnown RBP16.04■□□□□ 0.16
NFIX-208ENST00000587260 APBA1Q02410 837 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 TRPC3Q13507 836 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 NCOA4Q13772 614 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 BTG3Q14201 252 aaPredicted RBP16.04■□□□□ 0.16
NFIX-208ENST00000587260 PHLDB3Q6NSJ2 640 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 SYN2Q92777 582 aaPredicted RBP16.04■□□□□ 0.16
NFIX-208ENST00000587260 ZNF689Q96CS4 500 aaPredicted RBP16.04■□□□□ 0.16
NFIX-208ENST00000587260 FAM81BQ96LP2 452 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 PI4K2AQ9BTU6 479 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 ABHD10Q9NUJ1 306 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 KANSL3Q9P2N6 904 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 AGAP1Q9UPQ3 857 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 NLRC5Q86WI3 1866 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 PODXLO00592 558 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 ASS1P00966 412 aaKnown RBP16.04■□□□□ 0.16
NFIX-208ENST00000587260 CST3P01034 146 aaPredicted RBP16.04■□□□□ 0.16
NFIX-208ENST00000587260 CYP3A5P20815 502 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 PBX3P40426 434 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 RABGGTBP53611 331 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 JAM2P57087 298 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 MYL6P60660 151 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 SGSM1Q2NKQ1 1148 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms