RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 CASP10Q92851 521 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 C18orf25Q96B23 403 aaPredicted RBP18.7■□□□□ 0.58
DNMT1-212ENST00000587197 MKNK1Q9BUB5 465 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 PRG3Q9Y2Y8 225 aaPredicted RBP18.7■□□□□ 0.58
DNMT1-212ENST00000587197 IRAK3Q9Y616 596 aa18.7■□□□□ 0.58
DNMT1-212ENST00000587197 BICDL2A1A5D9 508 aa18.69■□□□□ 0.58
DNMT1-212ENST00000587197 NFICP08651 508 aa18.69■□□□□ 0.58
DNMT1-212ENST00000587197 HOXB8P17481 243 aaPredicted RBP18.69■□□□□ 0.58
DNMT1-212ENST00000587197 PAX3P23760 479 aa18.69■□□□□ 0.58
DNMT1-212ENST00000587197 MCCD1P59942 119 aaPredicted RBP18.69■□□□□ 0.58
DNMT1-212ENST00000587197 FKBP3Q00688 224 aaKnown RBP18.69■□□□□ 0.58
DNMT1-212ENST00000587197 ZP2Q05996 745 aa18.69■□□□□ 0.58
DNMT1-212ENST00000587197 ADAM9Q13443 819 aa18.69■□□□□ 0.58
DNMT1-212ENST00000587197 PSMD6Q15008 389 aa18.69■□□□□ 0.58
DNMT1-212ENST00000587197 EFCAB13Q8IY85 973 aa18.69■□□□□ 0.58
DNMT1-212ENST00000587197 CACTINQ8WUQ7 758 aaKnown RBP18.69■□□□□ 0.58
DNMT1-212ENST00000587197 SYAP1Q96A49 352 aaPredicted RBP18.69■□□□□ 0.58
DNMT1-212ENST00000587197 ZBP1Q9H171 429 aa18.69■□□□□ 0.58
DNMT1-212ENST00000587197 ADAM28Q9UKQ2 775 aa18.69■□□□□ 0.58
DNMT1-212ENST00000587197 FRMD4BQ9Y2L6 1034 aa18.69■□□□□ 0.58
DNMT1-212ENST00000587197 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.68■□□□□ 0.58
DNMT1-212ENST00000587197 PODXLO00592 558 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 CETN3O15182 167 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 ALADP13716 330 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 CLCNKBP51801 687 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 PMS1P54277 932 aaKnown RBP18.68■□□□□ 0.58
DNMT1-212ENST00000587197 WNT7BP56706 349 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 NLRP12P59046 1061 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 SPAG1Q07617 926 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 PAK1Q13153 545 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 CT47A1Q5JQC4 288 aaPredicted RBP18.68■□□□□ 0.58
DNMT1-212ENST00000587197 ANKRD40Q6AI12 368 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 ANKRD54Q6NXT1 300 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 LLGL2Q6P1M3 1020 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 GPR65Q8IYL9 337 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 RNF168Q8IYW5 571 aaPredicted RBP18.68■□□□□ 0.58
DNMT1-212ENST00000587197 RDH13Q8NBN7 331 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 NOC3LQ8WTT2 800 aaKnown RBP18.68■□□□□ 0.58
DNMT1-212ENST00000587197 BCL7CQ8WUZ0 217 aaPredicted RBP18.68■□□□□ 0.58
DNMT1-212ENST00000587197 NELFBQ8WX92 580 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 PAAF1Q9BRP4 392 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 PDE11AQ9HCR9 933 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 CD320Q9NPF0 282 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 TUBGCP4Q9UGJ1 667 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 SSX2IPQ9Y2D8 614 aa18.68■□□□□ 0.58
DNMT1-212ENST00000587197 C19orf67A6NJJ6 358 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 PI4K2BG5E9Z4 385 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 PSMC2P35998 433 aaKnown RBP18.67■□□□□ 0.58
DNMT1-212ENST00000587197 CASP4P49662 377 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 CLDN10P78369 228 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 ELAVL2Q12926 359 aaKnown RBP18.67■□□□□ 0.58
DNMT1-212ENST00000587197 KCNC3Q14003 757 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 CEP135Q66GS9 1140 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 KLHL10Q6JEL2 608 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 TTI2Q6NXR4 508 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 PPFIBP1Q86W92 1011 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 WDR49Q8IV35 697 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 TMC2Q8TDI7 906 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 PARD3BQ8TEW8 1205 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 FNBP1Q96RU3 617 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 EMILIN2Q9BXX0 1053 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 GOLGA2P5Q9HBQ8 144 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 INTS13Q9NVM9 706 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 TMEM63CQ9P1W3 806 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 DACH1Q9UI36 760 aa18.67■□□□□ 0.58
DNMT1-212ENST00000587197 USP15Q9Y4E8 981 aaPredicted RBP18.67■□□□□ 0.58
DNMT1-212ENST00000587197 TDRD15B5MCY1 1934 aaKnown RBP18.66■□□□□ 0.58
DNMT1-212ENST00000587197 TRIP11Q15643 1979 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 XIRP2A4UGR9 3374 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 ANO9A1A5B4 782 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 CLASP2O75122 1294 aaKnown RBP18.66■□□□□ 0.58
DNMT1-212ENST00000587197 TADA2AO75478 443 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 AKAP3O75969 853 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 B3GAT3O94766 335 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 KIF4AO95239 1232 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 AP3M2P53677 418 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 DUOXA2Q1HG44 320 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 SKOR2Q2VWA4 1001 aaPredicted RBP18.66■□□□□ 0.58
DNMT1-212ENST00000587197 FUT10Q6P4F1 479 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 CD300LGQ6UXG3 332 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 INTS8Q75QN2 995 aaKnown RBP18.66■□□□□ 0.58
DNMT1-212ENST00000587197 USP37Q86T82 979 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 VN1R2Q8NFZ6 395 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 CEP63Q96MT8 703 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 CGRRF1Q99675 332 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 HERC2P3Q9BVR0 1158 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 VN1R3Q9BXE9 311 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 EPHX3Q9H6B9 360 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 MRPL17Q9NRX2 175 aaKnown RBP18.66■□□□□ 0.58
DNMT1-212ENST00000587197 DPP3Q9NY33 737 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 CACNG4Q9UBN1 327 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 RWDD2AQ9UIY3 292 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 CTNND2Q9UQB3 1225 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 HCFC2Q9Y5Z7 792 aa18.66■□□□□ 0.58
DNMT1-212ENST00000587197 SF3B1O75533 1304 aaKnown RBP eCLIP18.66■□□□□ 0.58
DNMT1-212ENST00000587197 TRIM49BA6NDI0 452 aa18.65■□□□□ 0.58
DNMT1-212ENST00000587197 F8W810 466 aa18.65■□□□□ 0.58
DNMT1-212ENST00000587197 PIRO00625 290 aa18.65■□□□□ 0.58
DNMT1-212ENST00000587197 SLC16A3O15427 465 aaKnown RBP18.65■□□□□ 0.58
DNMT1-212ENST00000587197 TRAPPC3O43617 180 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms