RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 PTPRJQ12913 1337 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 ANO9A1A5B4 782 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 H3BNC9 293 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 EEF1GP26641 437 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 POLR2BP30876 1174 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 TAF6P49848 677 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 DLG4P78352 724 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 CETN1Q12798 172 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 PTPROQ16827 1216 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 SV2CQ496J9 727 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 DDX53Q86TM3 631 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 CCDC150Q8NCX0 1101 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 RABGGTAQ92696 567 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 MED15Q96RN5 788 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 PAAF1Q9BRP4 392 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 IMPG2Q9BZV3 1241 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 LMAN2LQ9H0V9 348 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 MMRN2Q9H8L6 949 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 TMEM8AQ9HCN3 771 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 CACNG4Q9UBN1 327 aa15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 RANBP2P49792 3224 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-209ENST00000585335 KCNJ18B7U540 433 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 GOLGA6L19H0YKK7 550 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 LPXNO60711 386 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 ITGB1P05556 798 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 PRKCSHP14314 528 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 CDK11BP21127 795 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 PIK3CAP42336 1068 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 GCLMP48507 274 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 MXI1P50539 228 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 MCCD1P59942 119 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 KCNJ12Q14500 433 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 ZACNQ401N2 412 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 KRT39Q6A163 491 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 FUT10Q6P4F1 479 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 DSTYKQ6XUX3 929 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 TRIM59Q8IWR1 403 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 HASPINQ8TF76 798 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 MARCH5Q9NX47 278 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 SSX2IPQ9Y2D8 614 aa15.72■□□□□ 0.11
SCAMP4-209ENST00000585335 PIRO00625 290 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 AFPP02771 609 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 URODP06132 367 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 ATICP31939 592 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 ZNF445P59923 1031 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 MYL7Q01449 175 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 NCOA4Q13772 614 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 USP41Q3LFD5 358 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 TDRD10Q5VZ19 366 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 PDE12Q6L8Q7 609 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 KIAA1841Q6NSI8 718 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 PDXDC1Q6P996 788 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 SV2AQ7L0J3 742 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 SPRED2Q7Z698 418 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 TMEM173Q86WV6 379 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 FAM200AQ8TCP9 573 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 GDPD5Q8WTR4 605 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 ZNF516Q92618 1163 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 SLC35C1Q96A29 364 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 HPDLQ96IR7 371 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 HERC2P3Q9BVR0 1158 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 ALG13Q9NP73 1137 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 TLR9Q9NR96 1032 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 SAMSN1Q9NSI8 373 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 FANCLQ9NW38 375 aa15.71■□□□□ 0.11
SCAMP4-209ENST00000585335 PES1O00541 588 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 P4HA2O15460 535 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 C4BPAP04003 597 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 SOD2P04179 222 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 ODC1P11926 461 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 P4HA1P13674 534 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 CA8P35219 290 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 LILRA4P59901 499 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 PPP3CAQ08209 521 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 MAN2A1Q16706 1144 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 SGSM1Q2NKQ1 1148 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 HSP90AA4PQ58FG1 418 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 TCP11X2Q5H9J9 407 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 C1orf220Q5T0J3 134 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 CDKAL1Q5VV42 579 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 TMC7Q7Z402 723 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 IRF2BP1Q8IU81 584 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 VPS52Q8N1B4 723 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 C3orf58Q8NDZ4 430 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 APPL2Q8NEU8 664 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 SPPL3Q8TCT6 385 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 MICAL1Q8TDZ2 1067 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 BCL7CQ8WUZ0 217 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 POF1BQ8WVV4 589 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 TAF4BQ92750 862 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 SUSD3Q96L08 255 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 GAS2L1Q99501 681 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 TUBGCP2Q9BSJ2 902 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 TTYH1Q9H313 450 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 CBX8Q9HC52 389 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 NGRNQ9NPE2 291 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 ENTPD7Q9NQZ7 604 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 SIX4Q9UIU6 781 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms