RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SLC7A14Q8TBB6 771 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 FEZF2Q8TBJ5 459 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 ASB7Q9H672 318 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 IGSF9Q9P2J2 1179 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 CPSF3Q9UKF6 684 aaKnown RBP13.44□□□□□ -0.26
SS18-225ENST00000585121 PCDHB8Q9UN66 801 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 POLIQ9UNA4 740 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 DERAQ9Y315 318 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 STYXL1Q9Y6J8 313 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 ARHGEF37A1IGU5 675 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 TULP1O00294 542 aaPredicted RBP13.44□□□□□ -0.26
SS18-225ENST00000585121 CCL16O15467 120 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 FAM189A1O60320 539 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 LDHAP00338 332 aaKnown RBP13.44□□□□□ -0.26
SS18-225ENST00000585121 FSHRP23945 695 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 ACOT2P49753 483 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 TMEM132DQ14C87 1099 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 ZBTB6Q15916 424 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 JADE1Q6IE81 842 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 SLC8B1Q6J4K2 584 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 ZNF461Q8TAF7 563 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 DHX58Q96C10 678 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 PYM1Q9BRP8 204 aaKnown RBP13.44□□□□□ -0.26
SS18-225ENST00000585121 OXCT2Q9BYC2 517 aaPredicted RBP13.44□□□□□ -0.26
SS18-225ENST00000585121 TMEM206Q9H813 350 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 MAGEF1Q9HAY2 307 aa13.44□□□□□ -0.26
SS18-225ENST00000585121 TRIOO75962 3097 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 FRMD3A2A2Y4 597 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 PRRG1O14668 218 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 PPP1R37O75864 691 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 IL18RAPO95256 599 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 POU2F2P09086 479 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 ROR1Q01973 937 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 YWHAHQ04917 246 aaPredicted RBP13.43□□□□□ -0.26
SS18-225ENST00000585121 TDGQ13569 410 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 MRPL58Q14197 206 aaKnown RBP13.43□□□□□ -0.26
SS18-225ENST00000585121 SPATA1Q5VX52 437 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 TPGS2Q68CL5 300 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 SHC4Q6S5L8 630 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 RSPO2Q6UXX9 243 aaPredicted RBP13.43□□□□□ -0.26
SS18-225ENST00000585121 GET4Q7L5D6 327 aaPredicted RBP13.43□□□□□ -0.26
SS18-225ENST00000585121 GRASPQ7Z6J2 395 aaPredicted RBP13.43□□□□□ -0.26
SS18-225ENST00000585121 NXPE3Q969Y0 559 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 FAM122AQ96E09 287 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 STRA6Q9BX79 667 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 KCNH6Q9H252 994 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 KCNK12Q9HB15 430 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 EPS15L1Q9UBC2 864 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 C2CD2Q9Y426 696 aa13.43□□□□□ -0.26
SS18-225ENST00000585121 ZFP37Q9Y6Q3 630 aaPredicted RBP13.43□□□□□ -0.26
SS18-225ENST00000585121 CITO14578 2027 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 TISP43B9A030 160 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 M0QZQ0 153 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 POLR2DO15514 142 aaKnown RBP13.42□□□□□ -0.26
SS18-225ENST00000585121 LRG1P02750 347 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 GARTP22102 1010 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 ASIC1P78348 528 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 DNM1Q05193 864 aaKnown RBP13.42□□□□□ -0.26
SS18-225ENST00000585121 E2F4Q16254 413 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 FBXL6Q8N531 539 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 MYADMQ96S97 322 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 KBTBD4Q9NVX7 518 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 FBXL5Q9UKA1 691 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 MAFFQ9ULX9 164 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 PCDHA7Q9UN72 937 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 TRIP11Q15643 1979 aa13.42□□□□□ -0.26
SS18-225ENST00000585121 TECTAO75443 2155 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 TBC1D4O60343 1298 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 ABLIM3O94929 683 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 NFICP08651 508 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 ODC1P11926 461 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 CPB1P15086 417 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 ATF2P15336 505 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 GUCY2FP51841 1108 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 KCNA1Q09470 495 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 PKP1Q13835 747 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 C9orf57Q5W0N0 161 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 NT5DC4Q86YG4 428 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 ELMOD1Q8N336 334 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 NOC3LQ8WTT2 800 aaKnown RBP13.41□□□□□ -0.26
SS18-225ENST00000585121 ASIC4Q96FT7 647 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 FAM213AQ9BRX8 229 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 TRIM9Q9C026 710 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 CYP4F11Q9HBI6 524 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 DPP3Q9NY33 737 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 ATP6V1DQ9Y5K8 247 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 PLXNA3P51805 1871 aa13.41□□□□□ -0.26
SS18-225ENST00000585121 WDR27A2RRH5 827 aa13.4□□□□□ -0.26
SS18-225ENST00000585121 OR6C75A6NL08 312 aa13.4□□□□□ -0.26
SS18-225ENST00000585121 KIAA0391O15091 583 aaKnown RBP13.4□□□□□ -0.26
SS18-225ENST00000585121 N4BP1O75113 896 aaKnown RBP13.4□□□□□ -0.26
SS18-225ENST00000585121 PRPF6O94906 941 aaKnown RBP13.4□□□□□ -0.26
SS18-225ENST00000585121 OAZ2O95190 189 aa13.4□□□□□ -0.26
SS18-225ENST00000585121 LAMP2P13473 410 aa13.4□□□□□ -0.26
SS18-225ENST00000585121 TYMPP19971 482 aa13.4□□□□□ -0.26
SS18-225ENST00000585121 ADSSP30520 456 aa13.4□□□□□ -0.26
SS18-225ENST00000585121 AARSP49588 968 aaKnown RBP eCLIP13.4□□□□□ -0.26
SS18-225ENST00000585121 LILRA4P59901 499 aa13.4□□□□□ -0.26
SS18-225ENST00000585121 PABPC1LQ4VXU2 614 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms