RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 CCDC34Q96HJ3 373 aa17.63■□□□□ 0.41
ERBB2-222ENST00000584908 TIGD1Q96MW7 591 aa17.63■□□□□ 0.41
ERBB2-222ENST00000584908 CLSTN3Q9BQT9 956 aa17.63■□□□□ 0.41
ERBB2-222ENST00000584908 KIAA1586Q9HCI6 787 aa17.63■□□□□ 0.41
ERBB2-222ENST00000584908 HSPBP1Q9NZL4 362 aa17.63■□□□□ 0.41
ERBB2-222ENST00000584908 PRKAG3Q9UGI9 489 aa17.63■□□□□ 0.41
ERBB2-222ENST00000584908 M0QZQ0 153 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 TKTP29401 623 aaKnown RBP17.62■□□□□ 0.41
ERBB2-222ENST00000584908 WNT7BP56706 349 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 ITIH3Q06033 890 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 CLUL1Q15846 466 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 PSMD5Q16401 504 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 PRSS55Q6UWB4 352 aaPredicted RBP17.62■□□□□ 0.41
ERBB2-222ENST00000584908 NELFCDQ8IXH7 590 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 EFCAB13Q8IY85 973 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 ELOA2Q8IYF1 753 aaPredicted RBP17.62■□□□□ 0.41
ERBB2-222ENST00000584908 FAM212AQ96EL1 285 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 UHRF1Q96T88 793 aaPredicted RBP17.62■□□□□ 0.41
ERBB2-222ENST00000584908 PCIF1Q9H4Z3 704 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 RBAKQ9NYW8 714 aaPredicted RBP17.62■□□□□ 0.41
ERBB2-222ENST00000584908 MTRRQ9UBK8 725 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 DPP7Q9UHL4 492 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 NUB1Q9Y5A7 615 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 BACE2Q9Y5Z0 518 aa17.62■□□□□ 0.41
ERBB2-222ENST00000584908 PIRO00625 290 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 GLUD1P00367 558 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 MRPL58Q14197 206 aaKnown RBP17.61■□□□□ 0.41
ERBB2-222ENST00000584908 ANKS3Q6ZW76 656 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 HS2ST1Q7LGA3 356 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 CEP57Q86XR8 500 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 TMEM130Q8N3G9 435 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 SPATA20Q8TB22 786 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 GOLGA5Q8TBA6 731 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 CCDC47Q96A33 483 aaKnown RBP17.61■□□□□ 0.41
ERBB2-222ENST00000584908 ADAM7Q9H2U9 754 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 KCTD10Q9H3F6 313 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 USP15Q9Y4E8 981 aaPredicted RBP17.61■□□□□ 0.41
ERBB2-222ENST00000584908 TSC2P49815 1807 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 C2orf16Q68DN1 1984 aa17.61■□□□□ 0.41
ERBB2-222ENST00000584908 DENND4AQ7Z401 1863 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 GOLGA8IPA6NC78 632 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 ZNF233A6NK53 670 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 GOLGA8JA6NMD2 632 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 I3L4J1 428 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 TBC1D4O60343 1298 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 RPL17P18621 184 aaKnown RBP17.6■□□□□ 0.41
ERBB2-222ENST00000584908 GUCY2FP51841 1108 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 C9orf57Q5W0N0 161 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 SLC9A9Q8IVB4 645 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 CMASQ8NFW8 434 aaPredicted RBP17.6■□□□□ 0.41
ERBB2-222ENST00000584908 RHOBTB2Q9BYZ6 727 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 PLEKHA4Q9H4M7 779 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 DPP3Q9NY33 737 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 PCDHB8Q9UN66 801 aa17.6■□□□□ 0.41
ERBB2-222ENST00000584908 DLL1O00548 723 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 PDXKO00764 312 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 PPEF2O14830 753 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 TGM5O43548 720 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 MCM4P33991 863 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 LILRA4P59901 499 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 RAB33AQ14088 237 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 SURF1Q15526 300 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 VARS2Q5ST30 1063 aaKnown RBP17.59■□□□□ 0.41
ERBB2-222ENST00000584908 SLC8B1Q6J4K2 584 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 CBWD2Q8IUF1 395 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 ADHFE1Q8IWW8 467 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 XXYLT1Q8NBI6 393 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 APPL2Q8NEU8 664 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 CXorf38Q8TB03 319 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 SFXN1Q9H9B4 322 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 MAN1C1Q9NR34 630 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 DMAC2Q9NW81 257 aa17.59■□□□□ 0.41
ERBB2-222ENST00000584908 C19orf67A6NJJ6 358 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 CLIC2O15247 247 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 ADAM12O43184 909 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 KIF20AO95235 890 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 ZP2Q05996 745 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 PNOCQ13519 176 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 MYBPC2Q14324 1141 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 SNRNP35Q16560 246 aaKnown RBP17.58■□□□□ 0.4
ERBB2-222ENST00000584908 ELMSAN1Q6PJG2 1045 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 RSPO2Q6UXX9 243 aaPredicted RBP17.58■□□□□ 0.4
ERBB2-222ENST00000584908 C15orf39Q6ZRI6 1047 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 CLEC17AQ6ZS10 378 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 GUF1Q8N442 669 aaKnown RBP17.58■□□□□ 0.4
ERBB2-222ENST00000584908 CACTINQ8WUQ7 758 aaKnown RBP17.58■□□□□ 0.4
ERBB2-222ENST00000584908 NECAB3Q96P71 396 aaPredicted RBP17.58■□□□□ 0.4
ERBB2-222ENST00000584908 GSDMAQ96QA5 445 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 PDE11AQ9HCR9 933 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 FBXW11Q9UKB1 542 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 TRAF3IP3Q9Y228 551 aa17.58■□□□□ 0.4
ERBB2-222ENST00000584908 H7C4K7 107 aa17.57■□□□□ 0.4
ERBB2-222ENST00000584908 SPTLC1O15269 473 aa17.57■□□□□ 0.4
ERBB2-222ENST00000584908 GADD45BO75293 160 aaPredicted RBP17.57■□□□□ 0.4
ERBB2-222ENST00000584908 OAZ2O95190 189 aa17.57■□□□□ 0.4
ERBB2-222ENST00000584908 TYMPP19971 482 aa17.57■□□□□ 0.4
ERBB2-222ENST00000584908 OR1D2P34982 312 aa17.57■□□□□ 0.4
ERBB2-222ENST00000584908 CBX2Q14781 532 aaPredicted RBP17.57■□□□□ 0.4
ERBB2-222ENST00000584908 NFIL3Q16649 462 aa17.57■□□□□ 0.4
ERBB2-222ENST00000584908 COBLL1Q53SF7 1204 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms