RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	CKB	P12277	381 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	MGAT2	Q10469	447 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	SEPT2	Q15019	361 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	ARHGEF25	Q86VW2	580 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	PTCD3	Q96EY7	689 aa	Known RBP	4	□□□□□ -1.77
VAPA-208	ENST00000584796	MYOC	Q99972	504 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	LDAH	Q9H6V9	325 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	VTA1	Q9NP79	307 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	TMEM140	Q9NV12	185 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	SLC17A6	Q9P2U8	582 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	ACTL7A	Q9Y615	435 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	SPATA31D1	Q6ZQQ2	1576 aa		4	□□□□□ -1.77
VAPA-208	ENST00000584796	RIMS1	Q86UR5	1692 aa	Known RBP	4	□□□□□ -1.77
VAPA-208	ENST00000584796	MADD	Q8WXG6	1647 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	FHAD1	B1AJZ9	1412 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	LRRC3C	A6NJW4	275 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	BRINP1	O60477	761 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	ALAS1	P13196	640 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	GYS2	P54840	703 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	SRSF2	Q01130	221 aa	Known RBP	3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	MTM1	Q13496	603 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	NOMO1	Q15155	1222 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	GEN1	Q17RS7	908 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	TOR2A	Q5JU69	321 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	FOXR2	Q6PJQ5	311 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	COLGALT2	Q8IYK4	626 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796		Q8NA96	180 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	ZNF384	Q8TF68	577 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	NUP133	Q8WUM0	1156 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	CYFIP2	Q96F07	1278 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	MARS2	Q96GW9	593 aa	Known RBP	3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	MED15	Q96RN5	788 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	ADI1	Q9BV57	179 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	KLK15	Q9H2R5	256 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	HSFX1	Q9UBD0	423 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	DMTF1	Q9Y222	760 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	TOP2B	Q02880	1626 aa		3.99	□□□□□ -1.77
VAPA-208	ENST00000584796	COL3A1	P02461	1466 aa	Predicted RBP	3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	GPR32	O75388	356 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	AMY1A	P04745	511 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	GPR3	P46089	330 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	MTNR1B	P49286	362 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	SCAND1	P57086	179 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	NOMO3	P69849	1222 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	ATP8B2	P98198	1209 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	SLFN5	Q08AF3	891 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	TAF7L	Q5H9L4	462 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	NOMO2	Q5JPE7	1267 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	DACT2	Q5SW24	774 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	KIAA0895L	Q68EN5	471 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	SP5	Q6BEB4	398 aa	Predicted RBP	3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	UBE3B	Q7Z3V4	1068 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	NPM2	Q86SE8	214 aa	Known RBP	3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	AFAP1L2	Q8N4X5	818 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	SSH3	Q8TE77	659 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	PNKP	Q96T60	521 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	CAAP1	Q9H8G2	361 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	ARPP21	Q9UBL0	812 aa	Predicted RBP	3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	ZBTB21	Q9ULJ3	1066 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	MTO1	Q9Y2Z2	717 aa	Known RBP	3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	TBX22	Q9Y458	520 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	ERICH3	Q5RHP9	1530 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	BCORL1	Q5H9F3	1711 aa		3.98	□□□□□ -1.77
VAPA-208	ENST00000584796	FRMPD1	Q5SYB0	1578 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	STRC	Q7RTU9	1775 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	CGB1	A6NKQ9	187 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	FAM171A2	A8MVW0	826 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	GSPT1	P15170	499 aa	Known RBP	3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	SLC5A3	P53794	718 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	PROK1	P58294	105 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	FAP	Q12884	760 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	ZGPAT	Q8N5A5	531 aa	Known RBP	3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	FITM2	Q8N6M3	262 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	UBR7	Q8N806	425 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	OR2I1P	Q8NGU4	316 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	UROC1	Q96N76	676 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	TIMP4	Q99727	224 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	HEPH	Q9BQS7	1158 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	CCM2L	Q9NUG4	571 aa	Predicted RBP	3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	C14orf119	Q9NWQ9	140 aa		3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	PCF11	O94913	1555 aa	Known RBP	3.97	□□□□□ -1.77
VAPA-208	ENST00000584796	TTBK1	Q5TCY1	1321 aa	Predicted RBP	3.96	□□□□□ -1.77
VAPA-208	ENST00000584796	EPRS	P07814	1512 aa	Known RBP	3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	TRGV11	A0A075B6L2	103 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	CDHR4	A6H8M9	788 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	WIPF3	A6NGB9	483 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	PROM1	O43490	865 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	PEX1	O43933	1283 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	SRGN	P10124	158 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	SOX5	P35711	763 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	FOLR3	P41439	243 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	STAT4	Q14765	748 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	SF3B3	Q15393	1217 aa	Known RBP	3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	SH2D3C	Q8N5H7	860 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	GSTO2	Q9H4Y5	243 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	KMT5A	Q9NQR1	393 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	ASB6	Q9NWX5	421 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	DNAJC28	Q9NX36	388 aa		3.96	□□□□□ -1.78
VAPA-208	ENST00000584796	RUVBL1	Q9Y265	456 aa	Known RBP	3.96	□□□□□ -1.78

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