RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 EXOC3L4Q17RC7 722 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 SGSM1Q2NKQ1 1148 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 EPC2Q52LR7 807 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 NLRC5Q86WI3 1866 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 LRRC52Q8N7C0 313 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 TAF4BQ92750 862 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 AAASQ9NRG9 546 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 SIX4Q9UIU6 781 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 SCN1AP35498 2009 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 PIRO00625 290 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 VNN1O95497 513 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 CST3P01034 146 aaPredicted RBP19.71■□□□□ 0.75
RFFL-211ENST00000584541 LAG3P18627 525 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 PAX3P23760 479 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 ALDH7A1P49419 539 aaKnown RBP19.71■□□□□ 0.75
RFFL-211ENST00000584541 MRE11P49959 708 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 MYL6P60660 151 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 UPP1Q16831 310 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 ZNF699Q32M78 642 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 SV2CQ496J9 727 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 DCLRE1AQ6PJP8 1040 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 TDHQ8IZJ6 230 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 EHBP1Q8NDI1 1231 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 HPDLQ96IR7 371 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 CRACR2AQ9BSW2 395 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 COLEC11Q9BWP8 271 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 DNAJB4Q9UDY4 337 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 FAN1Q9Y2M0 1017 aa19.71■□□□□ 0.75
RFFL-211ENST00000584541 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.7■□□□□ 0.74
RFFL-211ENST00000584541 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.7■□□□□ 0.74
RFFL-211ENST00000584541 TEX33O43247 280 aa19.7■□□□□ 0.74
RFFL-211ENST00000584541 B3GAT3O94766 335 aa19.7■□□□□ 0.74
RFFL-211ENST00000584541 TAF6P49848 677 aa19.7■□□□□ 0.74
RFFL-211ENST00000584541 BCAR1P56945 870 aa19.7■□□□□ 0.74
RFFL-211ENST00000584541 SP7Q8TDD2 431 aaPredicted RBP19.7■□□□□ 0.74
RFFL-211ENST00000584541 ZNF558Q96NG5 402 aa19.7■□□□□ 0.74
RFFL-211ENST00000584541 ERGIC2Q96RQ1 377 aa19.7■□□□□ 0.74
RFFL-211ENST00000584541 INTS2Q9H0H0 1204 aaKnown RBP19.7■□□□□ 0.74
RFFL-211ENST00000584541 CWH43Q9H720 699 aa19.7■□□□□ 0.74
RFFL-211ENST00000584541 NUB1Q9Y5A7 615 aa19.7■□□□□ 0.74
RFFL-211ENST00000584541 MRPL42Q9Y6G3 142 aaKnown RBP19.7■□□□□ 0.74
RFFL-211ENST00000584541 A0A1W2PQC6 194 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 NRP1O14786 923 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 STAU1O95793 577 aaKnown RBP19.69■□□□□ 0.74
RFFL-211ENST00000584541 ASS1P00966 412 aaKnown RBP19.69■□□□□ 0.74
RFFL-211ENST00000584541 P4HA1P13674 534 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 RABGGTBP53611 331 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 SYCP1Q15431 976 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 ZNF667Q5HYK9 610 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 CHRDL2Q6WN34 429 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 CXorf38Q8TB03 319 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 SEMA4DQ92854 862 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 NT5C1BQ96P26 610 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 PAAF1Q9BRP4 392 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 HCSTQ9UBK5 93 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 CACNG4Q9UBN1 327 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 PRG3Q9Y2Y8 225 aaPredicted RBP19.69■□□□□ 0.74
RFFL-211ENST00000584541 PCDHA11Q9Y5I1 949 aa19.69■□□□□ 0.74
RFFL-211ENST00000584541 TMEM189-UBE2V1I3L0A0 370 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 PPEF2O14830 753 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 B4GALT3O60512 393 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 TADA2AO75478 443 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 GALTP07902 379 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 SLC9A1P19634 815 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 PON1P27169 355 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 SLC11A1P49279 550 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 TNNC1P63316 161 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 NOP14P78316 857 aaKnown RBP19.68■□□□□ 0.74
RFFL-211ENST00000584541 KCNMA1Q12791 1236 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 TRIM65Q6PJ69 517 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 KCNT2Q6UVM3 1135 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 TMEM130Q8N3G9 435 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 NEK11Q8NG66 645 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 RABGGTAQ92696 567 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 PI4K2AQ9BTU6 479 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 LSM14BQ9BX40 385 aaKnown RBP19.68■□□□□ 0.74
RFFL-211ENST00000584541 VRTNQ9H8Y1 702 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 MSRAQ9UJ68 235 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 RWDD3Q9Y3V2 267 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 PCDHB12Q9Y5F1 795 aa19.68■□□□□ 0.74
RFFL-211ENST00000584541 ARHGEF37A1IGU5 675 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 GRXCR1A8MXD5 290 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 KPNA7A9QM74 516 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 AP5Z1O43299 807 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 TRAPPC3O43617 180 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 ZNF75DP51815 510 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 LILRA4P59901 499 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 RAB30Q15771 203 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 WDR72Q3MJ13 1102 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 DSTYKQ6XUX3 929 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 COLGALT1Q8NBJ5 622 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 LMO3Q8TAP4 145 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 ANP32BQ92688 251 aaKnown RBP19.67■□□□□ 0.74
RFFL-211ENST00000584541 MRFAP1L1Q96HT8 127 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 FAM81BQ96LP2 452 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 XYLT2Q9H1B5 865 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.67■□□□□ 0.749e-9■■■■■ 111.8
RFFL-211ENST00000584541 SIK3Q9Y2K2 1263 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 CEP290O15078 2479 aa19.67■□□□□ 0.74
RFFL-211ENST00000584541 KIF4AO95239 1232 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms